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Research Paper

Metabolic changes associated with dark-induced leaf senescence in Arabidopsis nadk2 mutants

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Article: 2215618 | Received 10 Feb 2023, Accepted 11 May 2023, Published online: 05 Jun 2023
 

ABSTRACT

Arabidopsis NADK2 (NAD kinase 2) is a chloroplast-localized enzyme involved in NADP+ synthesis, which acts as the final electron acceptor in the photosynthetic electron transfer chain. The NADK2-deficient mutant (nadk2) was used to analyze the effect of NAD(P)(H) unbalance in the dark-induced leaf senescence. During senescence, WT plants and nadk2 mutants showed a similar reduction in chlorophyll content. NAD(P)(H) quantification showed that the amount of total NAD(P)(H) decreased on the day 7 in WT but on the day 3 in nadk2. The phosphorylation ratio (i.e. NADP(H)/NAD(H)) decreased on day 1 in WT. In contrast, the nadk2 showed lower phosphorylation ratio at 0 day and no change throughout the aging process. Metabolome analysis showed that the metabolic profiles of both WT plants and nadk2 mutants subjected to dark-induced senescence adopted similar patterns as the senescence progressed. However, the changes in individual metabolites in the nadk2 mutants were different from those of the WT during dark-induced senescence.

Acknowledgments

We thank Ms. Yanhui Zu for technical assistance.

Disclosure statement

No potential conflict of interest was reported by the authors.

Abbreviations

CE-MS=

capillary electrophoresis-mass spectrometry

DHAP=

dihydroxyacetone phosphate

F6P=

fructose 6-phosphate

G1P=

glucose-1-phosphate

G-3-P=

glycerol 3-phosphate

G6P=

glucose-6-phosphate

HCA=

hierarchical clustering analysis

NADP+=

nicotinamide adenine dinucleotide phosphate

NAD+=

nicotinamide adenine dinucleotide

PCA=

Principal component analysis

PEP=

phosphoenolpyruvate

3PGA=

3-phosphoglycerate

R5P=

ribose-5-phosphate

RuBP=

ribulose-1,5-bisphosphate

Ru5P=

ribulose-5-phosphate

S7P=

sedoheptulose-7-phosphate

TCA=

tricarboxylic acid

WT=

wild type

Author contribution statement

Chaomurilege: Evaluated the data, carried out the experiments, and authored the manuscript.

Atsuko Miyagi: Conducted the metabolome analysis.

Toshiki Ishikawa: Evaluated the information.

Masatoshi Yamaguchi: Evaluated the information.

Hideki Murayama: Designed the metabolome analysis.

Maki Kawai-Yamada: Conceived the research project, analyzed the data, and authored the manuscript. On the findings and the manuscript, each author offered their thoughts.

Additional information

Funding

This work was supported by KAKENHI Grant Number 21H05647, 22H02298, and H23H04187 M. K-Y.