References
- Abdallah, S.J., Thomas, B.S., and Jonz, M.G., 2015. Aquatic surface respiration and swimming behaviour in adult and developing zebrafish exposed to hypoxia. The Journal of Experimental Biology, 218 (Pt 11), 1777–1786.
- Attili, A.F., et al., 1986. Bile acid-induced liver toxicity: relation to the hydrophobic-hydrophilic balance of bile acids. Medical Hypotheses, 19 (1), 57–69.
- Bartrons, R., and Caro, J., 2007. Hypoxia, glucose metabolism and the Warburg’s effect. Journal of Bioenergetics and Biomembranes, 39 (3), 223–229.
- Begley, M., Hill, C., and Gahan, C.G.M., 2006. Bile salt hydrolase activity in probiotics. Applied and Environmental Microbiology, 72 (3), 1729–1738.
- Benedetti, A., et al., 1997. Cytotoxicity of bile salts against biliary epithelium: a study in isolated bile ductule fragments and isolated perfused rat liver. Hepatology, 26 (1), 9–21.
- Bergmini, A., et al., 1997. Bile acids with differing hydrophilic-hydrophobic properties do not influence cytokine production by human monocytes and murine Kupffer cells. Hepatology, 25 (4), 927–933.
- Billington, D., et al., 1980. Effects of bile salts on the plasma membranes of isolated rat hepatocytes. The Biochemical Journal, 188 (2), 321–327.
- Brisson, D., et al., 2001. Glycerol: A neglected variable in metabolic processes? BioEssays: News and Reviews in Molecular, Cellular and Developmental Biology, 23 (6), 534–542.
- Bustamam, M.S.A., et al., 2022. The immunostimulant effects of Isochrysis galbana supplemented diet on the spleen of red hybrid tilapia (Oreochromis spp.) evaluated by nuclear magnetic resonance metabolomics. Aquaculture Nutrition, 2022, 1–22.
- Cachat, J., et al., 2010. Measuring behavioral and endocrine responses to novelty stress in adult zebrafish. Nature Protocols, 5 (11), 1786–1799.
- Chávez-talavera, O., et al., 2017. Bile acid control of metabolism and inflammation in obesity, type 2 diabetes, dyslipidemia and NAFLD. Gastroenterology, 152 (7), 1679–1694.e3. Iss
- Dantzer, R., 2009. Cytokine, sickness behavior, and depression. Immunology and Allergy Clinics of North America, 29 (2), 247–264.
- Desmoulin, F., et al., 2013. Metabonomics analysis of plasma reveals the lactate to cholesterol ratio as an independent prognostic factor of short-term mortality in acute heart failure. PLoS One, 8 (4), e60737.
- De Smet, I., et al., 1995. Significance of bile salt hydrolytic activities of lactobacilliIsochrysis galbanaOreochromis. The Journal of Applied Bacteriology, 79 (3), 292–301.
- Fickert, P., et al., 2005. Oncosis represents the main type of cell death in mouse models of cholestasis. Journal of Hepatology, 42 (3), 378–385.
- Fulcher, N., et al., 2017. Neurochemical and behavioral responses to unpredictable chronic mild stress following developmental isolation: the zebrafish as a model for major depression. Zebrafish, 14 (1), 23–34.
- Gaifem, J., et al., 2018. L-threonine supplementation during colitis onset delays disease recovery. Frontiers in Physiology, 9 (SEP), 1247.
- Ganeshan, K., and Chawla, A., 2014. Metabolic regulation of immune responses. Annual Review of Immunology, 32, 609–634.
- Gibney, S.M., and Drexhage, H.A., 2013. Evidence for a dysregulated immune system in the etiology of psychiatric disorders. Journal of Neuroimmune Pharmacology, 8 (4), 900–920.
- Gopal-Srivastava, R., and Hylemon, P.B., 1988. Purification and characterization of bile salt hydrolase from Clostridium perfringens. Journal of Lipid Research, 29 (8), 1079–1085. https://doi.org/10.1016/s0022-2275(20)38464-9
- González-Regueiro, J.A., et al., 2017. The role of bile acids in glucose metabolism and their relation with diabetes. Annals of Hepatology, 16 (Suppl. 1), S16–S20.
- Gray, L.R., Tompkins, S.C., and Taylor, E.B., 2014. Regulation of pyruvate metabolism and human disease. Cellular and Molecular Life Sciences, 71 (14), 2577–2604.
- Habte-Tsion, H.M., et al., 2015. A deficiency or an excess of dietary threonine level affects weight gain, enzyme activity, immune response and immune-related gene expression in juvenile blunt snout bream (Megalobrama amblycephala). Fish & Shellfish Immunology, 42 (2), 439–446.
- Haddad, J.J., 2003. Science review: redox and oxygen-sensitive transcription factors in the regulation of oxidant-mediated lung injury: role for hypoxia-inducible factor-1α. Critical Care, 7 (1), 47–54.
- Hatoum, O.A., and Binion, D.G., 2005. The vasculature and inflammatory bowel disease: contribution to pathogenesis and clinical pathology. Inflammatory Bowel Diseases, 11 (3), 304–313.
- He, G., et al., 2014. The effect of HIF-1α on glucose metabolism, growth and apoptosis of pancreatic cancerous cells. Asia Pacific Journal of Clinical Nutrition, 23 (1), 174–180.
- Hill, D.A., et al., 2012. Commensal bacteria-derived signals regulate basophil hematopoiesis and allergic inflammation. Nature Medicine, 18 (4), 538–546.
- Hofmann, A.F., 2002. Cholestatic liver disease: pathophysiology and therapeutic options. Liver, 22 (Suppl 2), 14–19.
- Hong, Y., et al., 2015. Growth, digestive and absorptive capacity and antioxidant status in intestine and hepatopancreas of sub-adult grass carp Ctenopharyngodon idella fed graded levels of dietary threonine. Journal of Animal Science and Biotechnology, 6 (1), 34.
- Houten, S.M., Watanabe, M., and Auwerx, J., 2006. Endocrine functions of bile acids. The EMBO Journal, 25 (7), 1419–1425.
- Howe, K., et al., 2013. The zebrafish reference genome sequence and its relationship to the human genome. Nature, 496 (7446), 498–503.
- Ikeda, Y., Morita, S.Y., and Terada, T., 2017. Cholesterol attenuates cytoprotective effects of phosphatidylcholine against bile salts. Scientific Reports, 7 (1), 306.
- Jarocki, P., and Targoński, Z., 2013. Genetic diversity of bile salt hydrolases among human intestinal bifidobacteria. Current Microbiology, 67 (3), 286–292.
- Johnson, C.D., 2005. UK guidelines for the management of acute pancreatitis. Gut, 54 (SUPPL. 3), 1–10.
- Johnson, R.W., 2002. The concept of sickness behavior: a brief chronological account of four key discoveries. Veterinary Immunology and Immunopathology, 87 (3–4), 443–450.
- Kamada, N., et al., 2013. Role of the gut microbiota in immunity and inflammatory disease. Nature Reviews. Immunology, 13 (5), 321–335.
- Kimmel, C.B., et al., 1995. Stages of embryonic development of the zebrafish. Developmental Dynamics, 203 (3), 253–310.
- Kirsten, K., et al., 2018. First description of behavior and immune system relationship in fish. Scientific Reports, 8 (1), 846.
- Kominsky, D.J., Campbell, E.L., and Colgan, S.P., 2010. Metabolic shifts in immunity and inflammation. Journal of Immunology, 184 (8), 4062–4068.
- Kominsky, D.J., et al., 2011. An endogenously anti-inflammatory role for methylation in mucosal inflammation identified through metabolite profiling. Journal of Immunology, 186 (11), 6505–6514.
- Kovács, R., et al., 2016. Acute and sub-chronic toxicity of four cytostatic drugs in zebrafish. Environmental Science and Pollution Research International, 23 (15), 14718–14729.
- Lewis, J.S., et al., 1999. Macrophage responses to hypoxia: relevance to disease mechanisms. Journal of Leukocyte Biology, 66 (6), 889–900.
- Li, J., et al., 2014. 1HNMR-based metabolomic profile of rats with experimental acute pancreatitis. BMC Gastroenterology, 14 (1), 115.
- Liu, X., et al., 2018. Acetate production from glucose and coupling to mitochondrial metabolism in mammals article acetate production from glucose and coupling to mitochondrial metabolism in mammals. Cell, 175 (2), 502–513.e13.
- Lou, G., et al., 2014. GPBAR1/TGR5 mediates bile acid-induced cytokine expression in murine Kupffer cells. PLoS One, 9 (4), e93567.
- Masuda, N., 1981. Deconjugation of bile salts by bacteroides and clostridium. Microbiology and Immunology, 25 (1), 1–11.
- Miyazaki, K., Nakayama, F., and Koga, A., 1984. Effect of chenodeoxycholic and ursodeoxycholic acids on isolated adult human hepatocytes. Digestive Diseases and Sciences, 29 (12), 1123–1130.
- Muller, N., J., and Schwarz, M., 2010. The role of immune system in schizophrenia. Current Immunology Reviews, 6 (3), 213–220.
- Muoio, D.M., and Newgard, C.B., 2006. Obesity-related derangements in metabolic regulation. Annual Review of Biochemistry, 75, 367–401.
- Oh, H.K., et al., 2008. Molecular cloning and characterization of a bile salt hydrolase from Lactobacillus acidophilus PF01. Journal of Microbiology and Biotechnology, 18 (3), 449–456.
- Perez, M.J., and Britz, O., 2009. Bile-acid-induced cell injury and protection. World Journal of Gastroenterology, 15 (14), 1677–1689.
- Režen, T., et al., 2022. The role of bile acids in carcinogenesis. Cellular and Molecular Life Sciences, 79 (5), 243.
- Ridlon, J.M., Kang, D.J., and Hylemon, P.B., 2006. Bile salt biotransformations by human intestinal bacteria. Journal of Lipid Research, 47 (2), 241–259.
- Ridlon, J.M., et al., 2016. Consequences of bile salt biotransformations by intestinal bacteria. Gut Microbes, 7 (1), 22–39.
- Saadi, S., Wrenshall, L.E., and Platt, J.L., 2002. Regional manifestations and control of the immune system. FASEB Journal, 16 (8), 849–856.
- Sakai, A., et al., 2012. Metabolomic analysis to discover candidate therapeutic agents against acute pancreatitis. Archives of Biochemistry and Biophysics, 522 (2), 107–120.
- SchÖLmerich, J., et al., 1984. Influence of hydroxylation and conjugation of bile salts on their membrane-damaging properties-studies on isolated hepatocytes and lipid membrane vesicles. Hepatology, 4 (4), 661–666.
- Schubert, R., et al., 1986. Structural changes in membranes of large unilamellar vesicles after binding of sodium cholate. Biochemistry, 25 (18), 5263–5269. https://doi.org/10.1021/bi00366a042
- Shi, Q., et al., 2015. Hydrogen-rich saline attenuates acute renal injury in sodium taurocholate-induced severe acute pancreatitis by inhibiting ROS and NF- B pathway. Mediators of Inflammation, 2015, 685043.
- Sokol, R.J., et al., 2001. Role of oxidant stress in the permeability transition induced in rat hepatic mitochondria by hydrophobic bile acids. Pediatric Research, 49 (4), 519–531.
- Sriram, G., et al., 2008. Global metabolic effects of glycerol kinase overexpression in rat hepatoma cells. Molecular Genetics and Metabolism, 93 (2), 145–159.
- Suarez, R.K., and Mommsen, T.P., 1987. Gluconeogenesis in teleost fishes. Canadian Journal of Zoology, 65 (8), 1869–1882.
- Sulaiman, F., et al., 2020. Metabolite profiles of red and yellow watermelon (Citrullus lanatus) cultivars using a 1H-NMR metabolomics approach. Molecules, 25 (14), 1–13.
- Swinnen, J.V., Brusselmans, K., and Verhoeven, G., 2006. Increased lipogenesis in cancer cells: new players, novel targets. Current Opinion in Clinical Nutrition and Metabolic Care, 9 (4), 358–365.
- Tang, Q., et al., 2021. Physiological functions of threonine in animals: beyond nutrition metabolism. Nutrients, 13 (8), 2592.
- Tian, N., et al., 2013. NMR-based metabonomic study of Chinese medicine Gegen Qinlian Decoction as an effective treatment for type 2 diabetes in rats. Metabolomics, 9 (6), 1228–1242.
- Van Bossuyt, H., et al., 1990. The role of bile acids in the development of endotoxemia during obstructive jaundice in the rat. Journal of Hepatology, 10 (3), 274–279. https://doi.org/10.1016/0168-8278(90)90132-B
- Vessey, D.A., 1978. The biochemical basis for the conjugation of bile acids with either glycine or taurine. The Biochemical Journal, 174 (2), 621–626.
- Wang, W.H., 2012. The elastic properties, elastic models and elastic perspectives of metallic glasses. Progress in Materials Science, 57 (3), 487–656.
- Wang, W., et al., 2013. Glycine metabolism in animals and humans: Implications for nutrition and health. Amino Acids, 45 (3), 463–477.
- Wang, X., et al., 2007. A deficiency or excess of dietary threonine reduces protein synthesis in jejunum and skeletal muscle of young pigs. The Journal of Nutrition, 137 (6), 1442–1446.
- Wang, Y., et al., 2017. 1H NMR-based metabolomics analysis of adult zebrafish (Danio rerio) after exposure to diniconazole as well as its bioaccumulation behavior. Chemosphere, 168, 1571–1577.
- Watanabe, M., et al., 2006. Bile acids induce energy expenditure by promoting intracellular thyroid hormone activation. Nature, 439 (7075), 484–489.
- Wijaya, A., et al., 2004. Cloning of the bile salt hydrolase (bsh) gene from Enterococcus faecium FAIR-E 345 and chromosomal location of bsh genes in food Enterococci. Journal of Food Protection, 67 (12), 2772–2778.
- Worley, B., and Powers, R., 2013. Multivariate analysis in metabolomics. Current Metabolomics, 1 (1), 92–107.
- Xue, L.L., Chen, H.H., and Jiang, J.G., 2017. Implications of glycerol metabolism for lipid production. Progress in Lipid Research, 68, 12–25.
- Yang, S., et al., 2021. Daphnetin ameliorates acute lung injury in mice with severe acute pancreatitis by inhibiting the JAK2–STAT3 pathway. Scientific Reports, 11 (1), 11491.
- Zakaria, F., et al., 2021. Perturbations in amino acid metabolism in reserpine-treated zebrafish brain detected by 1H nuclear magnetic resonance-based metabolomics. Zebrafish, 18 (1), 42–54.