368
Views
0
CrossRef citations to date
0
Altmetric
Research Articles

Novel Sarcoscypha Species from National Parks in Korea: Sarcoscypha humida sp. nov.

ORCID Icon, , , , ORCID Icon & ORCID Icon
Pages 51-57 | Received 18 Sep 2023, Accepted 10 Jan 2024, Published online: 07 Feb 2024

References

  • Boudier JLÉ. Nouvelle classification naturelle des Discomycetes charnus connus generalement sous le nom de Pezizes. Bull Soc Mycol France. 1885;1(1):91–120.
  • Baral HO. The European and North-American species of Sarcoscypha. 2004. Tübingen. Available from: http://www.gbif-mycology.de/HostedSites/Baral/index.html.
  • Wang Y-Z, Huang C-L, Wei J-L. Two new species of Sarcoscypha (Sarcosyphaceae, Pezizales) from Taiwan. Phytotaxa. 2016;245(2):169. doi: 10.11646/phytotaxa.245.2.8.
  • Tabarés M, Rius J, Rocabruna A. Fongs nous o poc citats a Catalunya. XII. Rev Catal Micol. 2010;32:13–21.
  • Tibuhwa DD. Morphology and taxonomy of Sarcoscypha ololosokwaniensis sp. nov.: a new Ascomycota species from Serengeti National Park-Tanzania. J Yeast Fung Res. 2011;2:1–6.
  • Kim C, Min Y, Lee JS. Studies of unrecorded or novel mushroom species survey (III). Incheon (Korea): National Institute of Biological Resources; 2015. p. 28–33.
  • Harrington F. Sarcoscypha in North America Pezizales, Sarcoscyphaceae. Mycotaxon. 1990;38:417–458.
  • Baral H. Taxonomische und ökologische Studien über Sarcoscypha coccinea agg., Zinnoberrote Kelchbecherlinge (Kurzfassung). Zeitschrift für Mykol. 1984;50:117–145.
  • Harrington FA. Relationships among Sarcoscypha species: evidence from molecular and morphological characters. Mycologia. 1998;90(2):235–243. doi: 10.2307/3761299.
  • Harrington FA, Potter D. Phylogenetic relationships within Sarcoscypha based upon nucleotide sequences of the internal transcribed spacer of nuclear ­ribosomal DNA. Mycologia. 1997;89(2):258–267. doi: 10.2307/3761080.
  • Gardes M, Bruns TD. ITS primers with enhanced specificity for basidiomycetes—application to the identification of mycorrhizae and rusts. Mol Ecol. 1993;2(2):113–118. doi: 10.1111/j.1365-294x.1993.tb00005.x.
  • Vilgalys R, Hester M. Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. J Bacteriol. 1990;172(8):4238–4246. doi: 10.1128/jb.172.8.4238-4246.1990.
  • White TJ, Bruns T, Lee S, et al. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, et al., editors. PCR protocols: a guide to methods and applications. San Diego (CA): Academic Press. Vol. 18; 1990. p. 315–322.
  • Liu YJ, Whelen S, Hall BD. Phylogenetic relationships among ascomycetes: evidence from an RNA polymerase II subunit. Mol Biol Evol. 1999;16(12):1799–1808. doi: 10.1093/oxfordjournals.molbev.a026092.
  • Rehner SA, Buckley E. A Beauveria phylogeny inferred from nuclear ITS and EF1-α sequences: evidence for cryptic diversification and links to Cordyceps teleomorphs. Mycologia. 2005;97(1):84–98. doi: 10.3852/mycologia.97.1.84.
  • Zeng M, Gentekaki E, Hyde KD, et al. Phylogeny and morphology of novel species and new collections related to Sarcoscyphaceae (Pezizales, Ascomycota) from Southwestern China and Thailand. Biology. 2023;12(1):130. doi: 10.3390/biology12010130.
  • Katoh K, Toh H. Parallelization of the MAFFT multiple sequence alignment program. Bioinformatics. 2010;26(15):1899–1900. doi: 10.1093/bioinformatics/btq224.
  • Kumar S, Stecher G, Tamura K. MEGA7: molecular evolutionary genetics analysis version 7.0 for bigger datasets. Mol Biol Evol. 2016;33(7):1870–1874. doi: 10.1093/molbev/msw054.
  • Ronquist F, Huelsenbeck JP. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics. 2003;19(12):1572–1574. doi: 10.1093/bioinformatics/btg180.
  • Darriba D, Taboada G, Doallo R, et al. jModelTest 2: more models, new heuristics and parallel computing. Nat Methods. 2012;9(8):772. doi: 10.1038/nmeth.2109.
  • Stamatakis A. RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics. 2006;22(21):2688–2690. doi: 10.1093/bioinformatics/btl446.
  • Miller M, Pfeiffer W, Schwartz T. Creating the CIPRES Science Gateway for inference of large phylogenetic trees. Gateway Comput Environ Workshop. 2010;2010:1–8.
  • Rambaut A. FigTree-version 1.4.3, a graphical viewer of phylogenetic trees; 2017. Available from: http://treebioedacuk/software/figtree.
  • Ridgway R. Color standards and color nomenclature. Washington (DC): The Author; 1912.
  • Kuo M. Sarcoscypha dudleyi; 2012. Available from: MushroomExpert.Com
  • Zhuang W, Yu Z, Wang Z. Flora fungorum sinicorum. Vol. 21. Hyaloscyphaceae, Sarcoscyphaceae Et Sarcosomataceae. Beijing (China): Science Press; 2004. In Chinese.
  • Le Gal M. Les Discomycetes de Madagascar. Paris (France): Laboratoire de Cryptogamie du Museum National d’Histoire Naturelle; 1953. p. 465.
  • Harrington FA, Pfister DH, Potter D, et al. Phylogenetic studies within the Pezizales. I. 18S rRNA sequence data and classification. Mycologia. 1999;91:41–45.