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Original Article

Metataxonomic and metaproteomic profiling of the oral microbiome in oral lichen planus - a pilot study

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Article: 2161726 | Received 27 Jun 2022, Accepted 19 Dec 2022, Published online: 28 Dec 2022

References

  • Gonzalez-Moles MA, Warnakulasuriya S, Gonzalez-Ruiz I, et al. Worldwide prevalence of oral lichen planus: a systematic review and meta-analysis. Oral Dis. 2021;27(4):813–10. DOI:10.1111/odi.13323
  • Li C, Tang X, Zheng X, et al. Global Prevalence and Incidence Estimates of Oral Lichen Planus: a Systematic Review and Meta-analysis. JAMA Dermatol. 2020;156(2):172–181. DOI:10.1001/jamadermatol.2019.3797
  • Robledo-Sierra J, Mattsson U, Jontell M. Use of systemic medication in patients with oral lichen planus - a possible association with hypothyroidism. Oral Dis. 2013;19(3):313–319.
  • Aghbari SMH, Abushouk AI, Attia A, et al. Malignant transformation of oral lichen planus and oral lichenoid lesions: a meta-analysis of 20095 patient data. Oral Oncol. 2017;68:92–102.
  • Gonzalez-Moles MA, Ruiz-Avila I, Gonzalez-Ruiz L, et al. Malignant transformation risk of oral lichen planus: a systematic review and comprehensive meta-analysis. Oral Oncol. 2019;96:121–130.
  • El-Howati A, Thornhill MH, Colley HE, et al. Immune mechanisms in oral lichen planus. Oral Dis. 2022. DOI:10.1111/odi.14142
  • Carrozzo M, Porter S, Mercadante V, et al. Oral lichen planus: a disease or a spectrum of tissue reactions? Types, causes, diagnostic algorhythms, prognosis, management strategies. Periodontol 2000. 2019;80(1):105–125.
  • Galimanas V, Hall MW, Singh N, et al. Bacterial community composition of chronic periodontitis and novel oral sampling sites for detecting disease indicators. Microbiome. 2014;2(1):32. DOI:10.1186/2049-2618-2-32
  • Sartor RB, Wu GD. Roles for Intestinal Bacteria, Viruses, and Fungi in Pathogenesis of Inflammatory Bowel Diseases and Therapeutic Approaches. Gastroenterology. 2017;152(2):327–39 e4.
  • Holmstrup P, Schiotz AW, Westergaard J. Effect of dental plaque control on gingival lichen planus. Oral Surg Oral Med Oral Pathol. 1990;69(5):585–590.
  • Salgado DS, Jeremias F, Capela MV, et al. Plaque control improves the painful symptoms of oral lichen planus gingival lesions. A short-term study. J Oral Pathol Med. 2013;42(10):728–732.
  • Backman K, Jontell M. Microbial-associated oral lichenoid reactions. Oral Dis. 2007;13(4):402–406.
  • Carbone M, Conrotto D, Carrozzo M, et al. Topical corticosteroids in association with miconazole and chlorhexidine in the long-term management of atrophic-erosive oral lichen planus: a placebo-controlled and comparative study between clobetasol and fluocinonide. Oral Dis. 1999;5(1):44–49.
  • Bankvall M, Sjoberg F, Gale G, et al. The oral microbiota of patients with recurrent aphthous stomatitis. J Oral Microbiol. 2014;6(1):25739.
  • Hijazi K, Lowe T, Meharg C, et al. Mucosal microbiome in patients with recurrent aphthous stomatitis. J Dent Res. 2015;94(3_suppl):87S–94S.
  • Dafar A, Bankvall M, Cevik-Aras H, et al. Lingual microbiota profiles of patients with geographic tongue. J Oral Microbiol. 2017;9(1):1355206.
  • Alam J, Lee A, Lee J, et al. Dysbiotic oral microbiota and infected salivary glands in Sjögren’s syndrome. PLoS ONE. 2020;15(3):e0230667. DOI:10.1371/journal.pone.0230667
  • Zhang X, Zhang D, Jia H, et al. The oral and gut microbiomes are perturbed in rheumatoid arthritis and partly normalized after treatment. Nat Med. 2015;21(8):895–905. DOI:10.1038/nm.3914
  • Li BZ, Zhou HY, Guo B, et al. Dysbiosis of oral microbiota is associated with systemic lupus erythematosus. Arch Oral Biol. 2020;113:104708.
  • Lee BM, Park JW, Jo JH, et al. Comparative analysis of the oral microbiome of burning mouth syndrome patients. J Oral Microbiol. 2022;14(1):2052632.
  • Lodi G, Pellicano R, Carrozzo M. Hepatitis C virus infection and lichen planus: a systematic review with meta-analysis. Oral Dis. 2010;16(7):601–612.
  • Petti S, Rabiei M, De Luca M, et al. The magnitude of the association between hepatitis C virus infection and oral lichen planus: meta-analysis and case control study. Odontology. 2011;99(2):168–178.
  • Jontell M, Watts S, Wallstrom M, et al. Human papilloma virus in erosive oral lichen planus. J Oral Pathol Med. 1990;19(6):273–277.
  • Syrjanen S, Lodi G, von Bultzingslowen I, et al. Human papillomaviruses in oral carcinoma and oral potentially malignant disorders: a systematic review. Oral Dis. 2011;Suppl 17:58–72.
  • Bornstein MM, Hakimi B, Persson GR. Microbiological findings in subjects with asymptomatic oral lichen planus: a cross-sectional comparative study. J Periodontol. 2008;79(12):2347–2355.
  • Choi YS, Kim Y, Yoon HJ, et al. The presence of bacteria within tissue provides insights into the pathogenesis of oral lichen planus. Sci Rep. 2016;6(1):29186. DOI:10.1038/srep29186
  • He Y, Gong D, Shi C, et al. Dysbiosis of oral buccal mucosa microbiota in patients with oral lichen planus. Oral Dis. 2017;23(5):674–682.
  • Kragelund C, Keller MK. The oral microbiome in oral lichen planus during a 1-year randomized clinical trial. Oral Dis. 2019;25(1):327–338.
  • Wang K, Lu W, Tu Q, et al. Preliminary analysis of salivary microbiome and their potential roles in oral lichen planus. Sci Rep. 2016;6(1):22943. DOI:10.1038/srep22943
  • Kramer IR, Lucas RB, Pindborg JJ, et al. Definition of leukoplakia and related lesions: an aid to studies on oral precancer. Oral Surg Oral Med Oral Pathol. 1978;46:518–539.
  • Dzidic M, Collado MC, Abrahamsson T, et al. Oral microbiome development during childhood: an ecological succession influenced by postnatal factors and associated with tooth decay. Isme J. 2018;12(9):2292–2306. DOI:10.1038/s41396-018-0204-z
  • Hernandez M, Planells P, Martinez E, et al. Microbiology of molar–incisor hypomineralization lesions. A pilot study. J Oral Microbiol. 2020;12(1):1766166.
  • Callahan BJ, McMurdie PJ, Rosen MJ, et al. DADA2: high-resolution sample inference from Illumina amplicon data. Nat Methods. 2016;13(7):581–583.
  • Quast C, Pruesse E, Yilmaz P, et al. The SILVA ribosomal RNA gene database project: improved data processing and web-based tools. Nucleic Acids Res. 2012;41:D590–6.
  • Lin H, Peddada SD. Analysis of compositions of microbiomes with bias correction. Nat Commun. 2020;11:3514.
  • Kondori N, Kurtovic A, Pineiro-Iglesias B, et al. Mass Spectrometry Proteotyping-Based Detection and Identification of Staphylococcus aureus, Escherichia coli, and Candida albicans in Blood. Front Cell Infect Microbiol. 2021;11:634215.
  • Perez-Riverol Y, Bai J, Bandla C, et al. The PRIDE database resources in 2022: a hub for mass spectrometry-based proteomics evidences. Nucleic Acids Res. 2022;50:D543–52.
  • Oksanen J, Blanchet F, Kindt R, et al. Vegan: community Ecology Package. R package, ver. 2015:20–10
  • Dray S, Dufour A-B. The ade4 Package: implementing the Duality Diagram for Ecologists. J Stat Softw. 2007;22(4):1–20.
  • Lin D, Yang L, Wen L, et al. Crosstalk between the oral microbiota, mucosal immunity, and the epithelial barrier regulates oral mucosal disease pathogenesis. Mucosal Immunol. 2021;14(6):1247–1258.
  • Carvalho M, Cavalieri D, Do Nascimento S, et al. Cytokines Levels and Salivary Microbiome Play a Potential Role in Oral Lichen Planus Diagnosis. Sci Rep. 2019;9:18137.
  • Deng S, Xu Y, Wang X, et al. Study on the Role of Salivary Flora and NF-kappaB Inflammatory Signal Pathway in Oral Lichen Planus. Inflammation. 2020;43:994–1008.
  • Du GH, Wang YF, Chen JJ, et al. Potential association between Fusobacterium nucleatum enrichment on oral mucosal surface and oral lichen planus. Oral Dis. 2020;26:122–130.
  • Wang K, Miao T, Lu W, et al. Analysis of oral microbial community and Th17-associated cytokines in saliva of patients with oral lichen planus. Microbiol Immunol. 2015;59(3):105–113. DOI:10.1111/1348-0421.12232
  • Wang X, Zhao Z, Tang N, et al. Microbial Community Analysis of Saliva and Biopsies in Patients with Oral Lichen Planus. Front Microbiol. 2020;11:629.
  • Hijazi K, Morrison RW, Mukhopadhya I, et al. Oral bacterial diversity is inversely correlated with mucosal inflammation. Oral Dis. 2020;26(7):1566–1575. DOI:10.1111/odi.13420
  • Al-Tarawneh SK, Border MB, Dibble CF, et al. Defining salivary biomarkers using mass spectrometry-based proteomics: a systematic review. OMICS. 2011;15:353–361.
  • Simon-Soro A, Tomas I, Cabrera-Rubio R, et al. Microbial geography of the oral cavity. J Dent Res. 2013;92(7):616–621.
  • Varoni EM, Bavarian R, Robledo-Sierra J, et al. World Workshop on Oral Medicine VII: targeting the microbiome for oral medicine specialists—part 1. A methodological guide. Oral Dis. 2019;25(Suppl S1):12–27. DOI:10.1111/odi.13063
  • Baek K, Lee J, Lee A, et al. Characterization of intratissue bacterial communities and isolation of Escherichia coli from oral lichen planus lesions. Sci Rep. 2020;10(1):3495. DOI:10.1038/s41598-020-60449-w
  • Yu FY, Wang QQ, Li M, et al. Dysbiosis of saliva microbiome in patients with oral lichen planus. BMC Microbiol. 2020;20(1):75. DOI:10.1186/s12866-020-01733-7
  • Garcia Lopez E, Martin-Galiano AJ. The Versatility of Opportunistic Infections Caused by Gemella Isolates is Supported by the Carriage of Virulence Factors from Multiple Origins. Front Microbiol. 2020;11:524.
  • Boix-Amoros A, Hernandez-Aguilar MT, Artacho A, et al. Human milk microbiota in sub-acute lactational mastitis induces inflammation and undergoes changes in composition, diversity and load. Sci Rep. 2020;10(1):18521.
  • Chaiyarit P, Taweechaisupapong S, Jaresitthikunchai J, et al. Comparative evaluation of 5–15-kDa salivary proteins from patients with different oral diseases by MALDI-TOF/TOF mass spectrometry. Clin Oral Investig. 2015;19(3):729–737.
  • Souza MM, Florezi GP, Nico M, et al. Salivary proteomics in lichen planus: a relationship with pathogenesis? Oral Dis. 2018;24(5):784–792.
  • Talungchit S, Buajeeb W, Lerdtripop C, et al. Putative salivary protein biomarkers for the diagnosis of oral lichen planus: a case-control study. BMC Oral Health. 2018;18:42.
  • Yang LL, Liu XQ, Liu W, et al. Comparative analysis of whole saliva proteomes for the screening of biomarkers for oral lichen planus. Inflamm Res. 2006;55(10):405–407.
  • Simon-Soro A, Mira A. Solving the etiology of dental caries. Trends Microbiol. 2015;23(2):76–82.
  • Tan TQ, Mason EJ, Wald ER, et al. Clinical characteristics of children with complicated pneumonia caused by Streptococcus pneumoniae. Pediatrics. 2002;110:1–6.
  • Li F, Zhai D, Wu Z, et al. Impairment of the Cell Wall Ligase, LytR-CpsA-Psr Protein (LcpC), in Methicillin Resistant Staphylococcus aureus Reduces Its Resistance to Antibiotics and Infection in a Mouse Model of Sepsis. Front Microbiol. 2020;11:557.
  • Gonzalez JM, Portillo MC, Belda-Ferre P, et al. Amplification by PCR artificially reduces the proportion of the rare biosphere in microbial communities. PLoS ONE. 2012;7(1):e29973.
  • Rosengarten R, Citti C, Glew M, et al. Host-pathogen interactions in mycoplasma pathogenesis: virulence and survival strategies of minimalist prokaryotes. Int J Med Microbiol. 2000;290(1):15–25. DOI:10.1016/S1438-42210080099-5