Publication Cover
Mitochondrial DNA Part A
DNA Mapping, Sequencing, and Analysis
Volume 33, 2022 - Issue 1-8
74
Views
0
CrossRef citations to date
0
Altmetric
Research Articles

Secondary contact of two cryptic Hokou gecko groups in the Izu Islands, Japan

ORCID Icon, , , &
Pages 53-60 | Received 09 Mar 2021, Accepted 18 Jan 2024, Published online: 29 Jan 2024

References

  • Abbott R, Albach D, Ansell S, Arntzen JW, Baird SJE, Bierne N, Boughman J, Brelsford A, Buerkle CA, Buggs R, et al. 2013. Hybridization and speciation. J Evol Biol. 26(2):229–246. doi: 10.1111/j.1420-9101.2012.02599.x.
  • Aogashima Village Board of Education and Aogashima Village. 1984. Life and culture in Aogashima Island. Tokyo: Aogashima Village.
  • Byrne K, Nichols RA. 1999. Culex pipiens in London Underground tunnels: differentiation between surface and subterranean populations. Heredity (Edinb). 82 (Pt 1)(1):7–15. doi: 10.1038/sj.hdy.6884120.
  • Chiba M, Hirano T, Yamazaki D, Ye B, Ito S, Kagawa O, Endo K, Nishida S, Hara S, Aratake K, et al. 2022. The mutual history of Schlegel’s Japanese gecko (Reptilia: squamata: gekkonidae) and humans inscribed in genes and ancient literature. PNAS Nexus. 1(5):pgac245. doi: 10.1093/pnasnexus/pgac245.
  • Cole NC, Jones CG, Harris S. 2005. The need for enemy-free space: the impact of an invasive gecko on island endemics. Biol. Conserv. 125(4):467–474. doi: 10.1016/j.biocon.2005.04.017.
  • Edgar RC. 2004. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32(5):1792–1797. doi: 10.1093/nar/gkh340.
  • Excoffier L, Lischer HEL. 2010. Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows. Mol Ecol Resour. 10(3):564–567. doi: 10.1111/j.1755-0998.2010.02847.x.
  • Gippet JM, Liebhold AM, Fenn-Moltu G, Bertelsmeier C. 2019. Human-mediated dispersal in insects. Curr Opin Insect Sci. 35:96–102.
  • Hao S, Ping J, Zhang Y. 2016. Complete mitochondrial genome of Gekko chinensis (Squamata, Gekkonidae). Mitochondrial DNA A DNA Mapp Seq Anal. 27(6):4226–4227. doi: 10.3109/19401736.2015.1022751.
  • Hara K. 1976. Range of distribution of Eumeces okadae (Scincidae). Jpn J Herpetol. 6(3):95–98. doi: 10.5358/hsj1972.6.3_95.
  • Hardin G. 1960. The competitive exclusion principle. Science. 131(3409):1292–1297.
  • Hirano T, Kameda Y, Chiba S. 2014. Phylogeny of the land snails Bradybaena and Phaeohelix (Pulmonata: bradybaenidae) in Japan. J. Molluscan Stud. 80(2):177–183. doi: 10.1093/mollus/eyu004.
  • Hirano T, Kameda Y, Saito T, Chiba S. 2019. Divergence before and after the isolation of islands: phylogeography of the Bradybaena land snails on the Ryukyu Islands of Japan. J. Biogeogr. 46(6):1197–1213. doi: 10.1111/jbi.13575.
  • Hirano T, Saito T, Chiba S. 2015. Phylogeny of freshwater viviparid snails in Japan. J Mollus Stud. 81(4):435–441. doi: 10.1093/mollus/eyv019.
  • Ichikawa S, Matsumoto T, Nakamura T, Kurisaki T. 2019. Provenance determination of prehistorical pottery from Oshima Island belonging to Izu islands (Tokyo, Japan) using X-ray fluorescence spectrometry. X-Ray Spectrom. 48(2):107–125. doi: 10.1002/xrs.3003.
  • Karasawa S, Nagata S, Aoki JI, Yahata K, Honda M. 2015. Phylogeographic study of Whip scorpions (Chelicerata: arachnida: thelyphonida) in Japan and Taiwan. Zoolog. Sci. 32:352.
  • Kasai S. 1968. General inventory of flora and fauna of Hachijojima Island. Tokyo: Tokyo Metropolitan Board of Education Hachijojima Island Branch.
  • Kim DI, Choi WJ, Park IK, Kim JS, Kim IH, Park D. 2018. Comparisons of microhabitat use of Schlegel’s Japanese gecko (Gekko japonicus) among three populations and four land cover types. J. Ecol. Environ. 42:1–7.
  • Kim IH, Park J, Cheon KS, Lee HJ, Kim JK, Park D. 2016. Complete mitochondrial genome of schlegel’s Japanese gecko Gekko japonicus (Squamata: gekkonidae). Mitochondrial DNA A DNA Mapp Seq Anal. 27(5):3684–3686. doi: 10.3109/19401736.2015.1079855.
  • Komaki S. 2021. Widespread misperception about a major East Asian biogeographic boundary exposed through bibliographic survey and biogeographic meta-analysis. J. Biogeogr. 48(9):2375–2386. doi: 10.1111/jbi.14210.
  • Kumazawa Y, Endo H. 2004. Mitochondrial genome of the Komodo dragon: efficient sequencing method with reptile-oriented primers and novel gene rearrangements. DNA Res. 11(2):115–125. doi: 10.1093/dnares/11.2.115.
  • Leigh JW, Bryant D. 2015. Popart: full‐feature software for haplotype ­network construction. Methods Ecol Evol. 6(9):1110–1116. doi: 10.1111/2041-210X.12410.
  • Li HM, Zeng DL, Guan QX, Qin PS, Qin XM. 2013. Complete mitochondrial genome of Gekko swinhonis (Squamata, Gekkonidae). Mitochondrial DNA. 24(2):86–88. doi: 10.3109/19401736.2012.717938.
  • McTavish CK. 2018. Median-joining networks for inferring intraspecific phylogenies. Plant Dis. 102:37–48.
  • Meyer JR, Dobias DT, Weitz JS, Barrick JE, Quick RT, Lenski RE. 2012. Repeatability and contingency in the evolution of a key innovation in Phage Lambda. 335.
  • Nakamura M, Marunouchi J. 2023. First record of Gekko hokouensis in Izu Oshima Island, Tokyo. Bull. Herpetol. Soc. Japan. 2023:86–88.
  • Nguyen HN, Lu C, Chu J, Grismer LL, Hung C, Lin S. 2019. Historical ­demography of four gecko species specializing in boulder cave ­habitat: implications in the evolutionary dead end hypothesis and conservation. Mol Ecol. 28(4):772–784. doi: 10.1111/mec.14985.
  • O’Brien SJ, Evermann JF. 1988. Interactive influence of infectious disease and genetic diversity in natural populations. Trends Ecol Evol. 3(10):254–259. doi: 10.1016/0169-5347(88)90058-4.
  • Ota H. 1998. Geographic patterns of endemism and speciation in ­amphibians and reptiles of the Ryukyu Archipelago, Japan, with ­special reference to their Paleogeographical implications. Res. Popul. Ecol. (Kyoto). 40(2):189–204. doi: 10.1007/BF02763404.
  • Ota H, Fusure K, Yagishita J. 1995. Colonizations of two exotic reptiles on Hachijojima Island of the Izu Group, Japan. Biol. Mag. Okinawa. 33:55–59.
  • Prince T, Kodera K, 720; Nihon Shoki.
  • Puillandre N, Dupas S, Dangles O, Zeddam JL, Capdevielle-Dulac C, Barbin K, Torres-Leguizamon M, Silvain JF. 2008. Genetic bottleneck in invasive species: the potato tuber moth adds to the list. Biol Invasions. 10(3):319–333. doi: 10.1007/s10530-007-9132-y.
  • Ronquist F, Huelsenbeck JP. 2003. MrBayes 3: bayesian phylogenetic inference under mixed models. Bioinformatics. 19(12):1572–1574. doi: 10.1093/bioinformatics/btg180.
  • Rozas J, Ferrer-Mata A, Sánchez-DelBarrio JC, Guirao-Rico S, Librado P, Ramos-Onsins SE, Sánchez-Gracia A. 2017. DnaSP 6: DNA sequence polymorphism analysis of large data sets. Mol Biol Evol. 34(12):3299–3302. doi: 10.1093/molbev/msx248.
  • Sabath MD. 1981. Gekkonid lizards of Guam, Mariana Islands: reproduction and habitat preference. J. Herpetol. 15(1):71–75. doi: 10.2307/1563648.
  • Slatkin M. 1987. Gene flow and the geographic structure of natural populations. Science. 236(4803):787–792. doi: 10.1126/science.3576198.
  • Stejneger L. 1907. Herpetology of Japan and adjacent territory. Bull. United States Natl. Museum. 58(58):i–577. doi: 10.5479/si.03629236.58.i.
  • Takahashi H. 2005. A case of artificial overseas dispersal of Hemidactylus frenatus. Bull. Herpetol. Soc. Japan. 2005:116–119.
  • Tamura K, Stecher G, Peterson D, Filipski A, Kumar S. 2013. MEGA6: ­molecular evolutionary genetics analysis version 6.0. Mol Biol Evol. 30(12):2725–2729. doi: 10.1093/molbev/mst197.
  • Toda M, Hikida T. 2011. Possible Incursions of Gekko hokouensis (Reptilia: squamata) into Non-native Area: an Example from Yakushima Island of the Northern Ryukyus, Japan. Current Herpetol. 30(1):33–39. doi: 10.5358/hsj.30.33.
  • Toda M, Hikida T, Ota H. 1997. Genetic variation among insular populations of Gekko hokouensis (Reptilia: squamata) near the Northeastern borders of the oriental and palearctic zoogeographic regions in the Northern Ryukyus, Japan. Zoolog. Sci. 14(5):859–867. doi: 10.2108/zsj.14.859.
  • Toda M, Hikida T, Ota H. 2001. Discovery of sympatric cryptic species within Gekko hokouensis (Gekkonidae: squamata) from the Okinawa Islands, Japan, by use of allozyme data. Zool Scr. 30(1):1–11. doi: 10.1046/j.1463-6409.2001.00053.x.
  • Toda M, Sengoku S, Hikida T, Ota H. 2008. Description of two new species of the genus Gekko (Squamata: gekkonidae) from the Tokara and Amami Island Groups in the Ryukyu Archipelago, Japan. Copeia. 2008(2):452–466. doi: 10.1643/CH-06-281.
  • Wickramasinghe N, Wickramasinghe LJM, Vidanapathirana DR, Tennakoon KH, Samarakoon SR, Gower DJ. 2022. A molecular-genetics perspective on the systematics of the parthenogenetic flowerpot blindsnake Indotyphlops braminus (Daudin, 1803) (Squamata: serpentes: typhlopidae). Syst. Biodivers. 20(1):1–16. doi: 10.1080/14772000.2022.2062478.
  • Wilson JRU, Dormontt EE, Prentis PJ, Lowe AJ, Richardson DM. 2009. Something in the way you move: dispersal pathways affect invasion success. Trends Ecol Evol. 24(3):136–144. doi: 10.1016/j.tree.2008.10.007.
  • Winchell KM, Reynolds RG, Prado-Irwin SR, Puente-Rolón AR, Revell LJ. 2016. Phenotypic shifts in urban areas in the tropical lizard Anolis cristatellus. Evolution. 70(5):1009–1022. doi: 10.1111/evo.12925.
  • Yan J, Wang Q, Chang Q, Ji X, Zhou K. 2010. The divergence of two independent lineages of an endemic Chinese gecko, Gekko swinhonis, launched by the Qinling orogenic belt. Mol Ecol. 19(12):2490–2500. doi: 10.1111/j.1365-294X.2010.04660.x.
  • Zhou K, Liu Y, Li D. 1982. Three new species of Gekko and remarks on Gekko hokouensis (Lacertiformes, Gekkonidae). Acta Zootaxon Sin. 7(4):438–446.
  • Zhou K, Wang Q. 2008. New species of Gekko (Squamata: sauria: gekkonidae) from China: morphological and molecular evidence. Zootaxa. 1778(1):59–68. doi: 10.11646/zootaxa.1778.1.5.

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.