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Genomics

Genetic variation in targets of lipid-lowering drugs and amyotrophic lateral sclerosis risk: a Mendelian randomization study

, , , , , , , & show all
Pages 197-206 | Received 05 Apr 2023, Accepted 01 Sep 2023, Published online: 09 Sep 2023

Figures & data

Figure 1 Flow chart showing the process for the Mendelian randomization analyses. eQTL: expression quantitative trait loci; ALS: amyotrophic lateral sclerosis; MAF: minor allele frequency; GWAS: genome-wide association studies; SMR: summary data-based mendelian randomization; IVW: inverse-variance weighted.

Figure 1 Flow chart showing the process for the Mendelian randomization analyses. eQTL: expression quantitative trait loci; ALS: amyotrophic lateral sclerosis; MAF: minor allele frequency; GWAS: genome-wide association studies; SMR: summary data-based mendelian randomization; IVW: inverse-variance weighted.

Figure 2 Information of genetic instruments. HMGCR: HMG-CoA reductase; PCSK9: proprotein convertase subtilisin/kexin type 9; NPC1L1: Niemann–Pick C1-like 1; APOB: apolipoprotein B; SMR: summary data-based mendelian randomization; eQTL: expression quantitative trait loci; MAF: minor allele frequency; SNP: single nucleotide polymorphism; LDL: low-density lipoprotein.

Figure 2 Information of genetic instruments. HMGCR: HMG-CoA reductase; PCSK9: proprotein convertase subtilisin/kexin type 9; NPC1L1: Niemann–Pick C1-like 1; APOB: apolipoprotein B; SMR: summary data-based mendelian randomization; eQTL: expression quantitative trait loci; MAF: minor allele frequency; SNP: single nucleotide polymorphism; LDL: low-density lipoprotein.

Figure 3 Scatter plot showed the SNP effects on HMGCR inhibitors-taking trait versus ALS. HMGCR: HMG-CoA reductase; ALS: amyotrophic lateral sclerosis.

Figure 3 Scatter plot showed the SNP effects on HMGCR inhibitors-taking trait versus ALS. HMGCR: HMG-CoA reductase; ALS: amyotrophic lateral sclerosis.

Figure 4 Leave-one-out analysis showed the removal of any single SNP did not change the result.

Figure 4 Leave-one-out analysis showed the removal of any single SNP did not change the result.

Figure 5 SMR association between expression of gene HMGCR, PCSK9, NPC1L1, or APOB and ALS outcome. SNP: single nucleotide polymorphism; OR: odds ratio; CI: confidence interval; HEIDI: heterogeneity in dependent instruments.

Figure 5 SMR association between expression of gene HMGCR, PCSK9, NPC1L1, or APOB and ALS outcome. SNP: single nucleotide polymorphism; OR: odds ratio; CI: confidence interval; HEIDI: heterogeneity in dependent instruments.

Figure 6 Two-sample MR association between lipid-lowering drug mediated by gene HMGCR, PCSK9, NPC1L1, or APOB and ALS outcome. ALS: amyotrophic lateral sclerosis; SNP: single nucleotide polymorphism; OR: odds ratio; CI: confidence interval; HEIDI: heterogeneity in dependent instruments.

Figure 6 Two-sample MR association between lipid-lowering drug mediated by gene HMGCR, PCSK9, NPC1L1, or APOB and ALS outcome. ALS: amyotrophic lateral sclerosis; SNP: single nucleotide polymorphism; OR: odds ratio; CI: confidence interval; HEIDI: heterogeneity in dependent instruments.
Supplemental material

Supplemental Material

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Data availability statement

The summary statistics used in the current study are available from the corresponding author upon reasonable request. Detailed information on the summarized data sources for the instrumental variables is presented in Supplementary Table S1.