Endogenous cAMP elevation in Brassica napus causes changes in phytohormone levels

References

• Sutherland EW. Studies on the mechanism of hormone action. Sci. 1972;177(4047):401–15. doi:10.1126/science.177.4047.401.
   PubMed Web of Science ®Google Scholar
• Botsford JL, Harman JG. Cyclic AMP in prokaryotes. Microbiol Rev. 1992;56(1):100–122. doi:10.1128/mr.56.1.100-122.1992.
   PubMedGoogle Scholar
• Bahn YS, Molenda M, Staab JF, Lyman CA, Gordon LJ, Sundstrom P. Genome-wide transcriptional profiling of the cyclic AMP-dependent signaling pathway during morphogenic transitions of Candida albicans. Eukaryot Cell. 2007;6(12):2376–2390. doi:10.1128/EC.00318-07.
   PubMedGoogle Scholar
• Biswas A, Bhattacharya A, Das PK. Role of cAMP signaling in the survival and infectivity of the protozoan parasite, leishmania donovani. Mol Biol Int. 2011;2011:782971. doi:10.4061/2011/782971.
   PubMedGoogle Scholar
• Kamenetsky M, Middelhaufe S, Bank EM, Levin LR, Buck J, Steegborn C. Molecular details of cAMP generation in mammalian cells: a tale of two systems. J Mol Biol. 2006;362(4):623–639. doi:10.1016/j.jmb.2006.07.045.
   PubMed Web of Science ®Google Scholar
• Assmann SM. Cyclic AMP as a second messenger in higher plants: status and future prospects. Plant Physiol. 1995;108:885–889. doi:10.1104/pp.108.3.885.
   PubMed Web of Science ®Google Scholar
• Gehring C. Adenyl cyclases and cAMP in plant signaling – past and present. Cell Commun Signal. 2010;8(1):15. doi:10.1186/1478-811X-8-15.
   PubMedGoogle Scholar
• Gehring C, Turek IS. Cyclic nucleotide monophosphates and their cyclases in plant signaling. Front Plant Sci. 2017;8:1704. doi:10.3389/fpls.2017.01704.
   PubMed Web of Science ®Google Scholar
• Blanco E, Fortunato S, Viggiano L, de Pinto MC. Cyclic AMP: a polyhedral signalling molecule in plants. Int J Mol Sci. 2020;21(14):4862. doi:10.3390/ijms21144862.
   PubMed Web of Science ®Google Scholar
• Xu R, Guo Y, Peng S, Liu J, Li P, Jia W, Zhao J. Molecular targets and biological functions of cAMP signaling in Arabidopsis. Biomolecules. 2021;11(5):688. doi:10.3390/biom11050688.
   PubMed Web of Science ®Google Scholar
• Sassone–Corsi P. The cyclic AMP pathway. Cold Spring Harb Perspect Biol. 2012;4(12):a011148. doi:10.1101/cshperspect.a011148.
   PubMed Web of Science ®Google Scholar
• Gancedo JM. Biological roles of cAMP: variations on a theme in the different kingdoms of life. Biol Rev Camb Philos Soc. 2013;88(3):645–668. doi:10.1111/brv.12020.
   PubMed Web of Science ®Google Scholar
• Steegborn C. Structure, mechanism, and regulation of soluble adenylyl cyclases — similarities and differences to transmembrane adenylyl cyclases. Biochim Biophys Acta. 2014;1842(12):2535–2547. doi:10.1016/j.bbadis.2014.08.012.
   PubMed Web of Science ®Google Scholar
• Ruzvidzo O, Gehring C, Wong A. New perspectives on plant adenylyl cyclases. Front Mol Biosci. 2019;6:136. doi:10.3389/fmolb.2019.00136.
   PubMed Web of Science ®Google Scholar
• Jeffery CJ. Protein moonlighting: what is it, and why is it important? Philos Trans R Soc Lond B Biol Sci. 2018;373:20160523. doi:10.1098/rstb.2016.0523.
   PubMedGoogle Scholar
• Huberts DH, van der Klei IJ. Moonlighting proteins: an intriguing mode of multitasking. Biochim Biophys Acta. 2010;1803(4):520–525. doi:10.1016/j.bbamcr.2010.01.022.
   PubMed Web of Science ®Google Scholar
• Al-Younis I, Wong A, Lemtiri-Chlieh F, Schmockel S, Tester M, Gehring C, Donaldson L. The Arabidopsis thaliana K+-uptake permease 5 (AtKUP5) contains a functional cytosolic adenylate cyclase essential for K+ transport. Front Plant Sci. 2018;9:1645. doi:10.3389/fpls.2018.01645.
   PubMed Web of Science ®Google Scholar
• Al-Younis I, Wong A, Gehring C. The Arabidopsis thaliana K+-uptake permease 7 (AtKUP7) contains a functional cytosolic adenylate cyclase catalytic centre. FEBS Lett. 2015;589(24PartB):3848–3852. doi:10.1016/j.febslet.2015.11.038.
   PubMedGoogle Scholar
• Bianchet C, Wong A, Quaglia M, Alqurashi M, Gehring C, Ntoukakis V, Pasqualini S. An Arabidopsis thaliana leucine-rich repeat protein harbors an adenylyl cyclase catalytic center and affects responses to pathogens. J Plant Physiol. 2019;232:12–22. doi:10.1016/j.jplph.2018.10.025.
   PubMed Web of Science ®Google Scholar
• Chatukuta P, Dikobe TB, Kawadza DT, Sehlabane KS, Takundwa MM, Wong A, Gehring C, Ruzvidzo O. An Arabidopsis clathrin assembly protein with a predicted role in plant defense can function as an adenylate cyclase. Biomolecules. 2018;8(2):15. doi:10.3390/biom8020015.
   PubMed Web of Science ®Google Scholar
• Ruzvidzo O, Dikobe BT, Kawadza DT, Mabadahanye GH, Chatukuta P, Kwezi L. Recombinant expression and functional testing of candidate adenylate cyclase domains. Methods Mol Biol. 2013;1016:13–25.
   PubMedGoogle Scholar
• Yang H, Zhao Y, Chen N, Liu Y, Yang S, Du H, Wang W, Wu J, Tai F, Chen F. et al. A new adenylyl cyclase, putative disease–resistance RPP13–like protein 3, participates in abscisic acid-mediated resistance to heat stress in maize. J Exp Bot. 2021;72(2):283–301. doi:10.1093/jxb/eraa431.
   PubMed Web of Science ®Google Scholar
• Uematsu K, Fukui Y. Role and regulation of cAMP in seed germination of phacelia tanacetifolia. Plant Physiol Biochem. 2008;46(8–9):768–774. doi:10.1016/j.plaphy.2007.10.015.
   PubMed Web of Science ®Google Scholar
• Hall KA, Galsky AG. The action of cyclic–AMP on GA3 controlled responses IV. Characteristics of the promotion of seed germination in Lactuca sativa variety ‘Spartan lake’ by gibberellic acid and cyclic 3’,5‘–adenosine monophosphate. Plant Cell Physiol. 1973;14:565–571.
   Web of Science ®Google Scholar
• Salomon D, Mascarenhas JP. Auxin–induced synthesis of cyclic 3‘, 5’-adenosine monophosphate in Avena coleoptiles. Life Sci. 1971;II(10):879–885. doi:10.1016/0024-3205(71)90200-1.
   Google Scholar
• Truelsen TA, Delaughe E, Verbeek–Wyndaele R. Cyclic AMP induced growth promotion in sunflower callus tissue. Arch Int de Physiologie et de Biochimie. 1974;82(1):109–114. doi:10.3109/13813457409070458.
   PubMed Web of Science ®Google Scholar
• Wood HN, Braun AC. 8-bromoadenosine 3′: 5′-cyclic monophosphate as a promoter of cell division in excised tobacco pith parenchyma tissue. Proc Natl Acad Sci U S A. 1973;70(2):447–450. doi:10.1073/pnas.70.2.447.
   PubMed Web of Science ®Google Scholar
• Qi L, Kwiatkowski M, Chen H, Hoermayer L, Sinclair S, Zou M, Del Genio CI, Kubeš MF, Napier R, Jaworski K. et al. Adenylate cyclase activity of TIR1/AFB auxin receptors in plants. Nature. 2022;611(7934):133–138. doi:10.1038/s41586-022-05369-7.
   PubMed Web of Science ®Google Scholar
• Nemhauser JL, Hong F, Chory J. Different plant hormones regulate similar processes through largely nonoverlapping transcriptional responses. Cell. 2006;126(3):467–475. doi:10.1016/j.cell.2006.05.050.
   PubMed Web of Science ®Google Scholar
• Wu C, Tang S, Li G, Wang S, Fahad S, Ding Y. Roles of phytohormone changes in the grain yield of rice plants exposed to heat: a review. PeerJ. 2019;7:e7792. doi:10.7717/peerj.7792.
   PubMed Web of Science ®Google Scholar
• Iqbal S, Wang X, Mubeen I, Kamran M, Kanwal I, Diaz GA, Abbas A, Parveen A, Atiq MN, Alshaya H. et al. Phytohormones trigger drought tolerance in crop plants: outlook and future perspectives. Front Plant Sci. 2021;12:799318. doi:10.3389/fpls.2021.799318.
   PubMed Web of Science ®Google Scholar
• Abdelrahman M, El-Sayed M, Jogaiah S, Burritt DJ, Tran LP. The “STAY-GREEN” trait and phytohormone signaling networks in plants under heat stress. Plant Cell Rep. 2017;36(7):1009–1025. doi:10.1007/s00299-017-2119-y.
   PubMed Web of Science ®Google Scholar
• Llanes A, Andrade A, Alemano S, Luna V. Alterations of endogenous hormonal levels in plants under drought and salinity. Am J Plant Sci. 2016;7(9):1357–1371. doi:10.4236/ajps.2016.79129.
   Google Scholar
• Chen X, Qin S, Li C, Wu Q, Jiang C, Yang J, Guo X, Ou C. Differential gene expressions and phytohormone changes altered Lonicera japonica quality after plant introduction. Pharmacogn Mag. 2019;15(60):18–23. doi:10.4103/pm.pm_317_18.
   Web of Science ®Google Scholar
• Zhang K, He J, Liu L, Xie R, Qiu L, Li X, Yuan W, Chen K, Yin Y, Kyaw MMM. et al. A convenient, rapid and efficient method for establishing transgenic lines of Brassica napus. Plant Methods. 2020;16(1):43. doi:10.1186/s13007-020-00585-6.
   PubMed Web of Science ®Google Scholar
• Wang Z, Chen Y, Fang H, Shi H, Chen K, Zhang Z, Tan X. Selection of reference genes for quantitative reverse-transcription polymerase chain reaction normalization in Brassica napus under various stress conditions. Mol Genet Genomics. 2014;289(5):1023–1035. doi:10.1007/s00438-014-0853-1.
   PubMed Web of Science ®Google Scholar
• Kim D, Paggi JM, Park C, Bennett C, Salzberg SL. Graph-based genome alignment and genotyping with HISAT2 and HISAT-genotype. Nat Biotechnol. 2019;37(8):907–915. doi:10.1038/s41587-019-0201-4.
   PubMed Web of Science ®Google Scholar
• Love MI, Huber W, Anders S. Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2. Genome Biol. 2014;15(12):550. doi:10.1186/s13059-014-0550-8.
   PubMed Web of Science ®Google Scholar
• Mao X, Cai T, Olyarchuk JG, Wei L. Automated genome annotation and pathway identification using the KEGG orthology (KO) as a controlled vocabulary. Bioinformatics. 2005;21(19):3787–3793. doi:10.1093/bioinformatics/bti430.
   PubMed Web of Science ®Google Scholar
• Young MD, Wakefield MJ, Smyth GK, Oshlack A. Gene ontology analysis for RNA-seq: accounting for selection bias. Genome Biol. 2010;11(2):R14. doi:10.1186/gb-2010-11-2-r14.
   PubMed Web of Science ®Google Scholar
• Aoyama T, Chua NH. A glucocorticoid-mediated transcriptional induction system in transgenic plants. Plant Journal. 1997;11(3):605–612. doi:10.1046/j.1365-313X.1997.11030605.x.
   PubMed Web of Science ®Google Scholar
• Zuo J, Chua NH. Chemical-inducible systems for regulated expression of plant genes. Curr Opin Biotechnol. 2000;11(2):146–151. doi:10.1016/S0958-1669(00)00073-2.
   PubMed Web of Science ®Google Scholar
• Sabetta W, Vandelle E, Locato V, Costa A, Cimini S, Bittencourt Moura A, Luoni L, Graf A, Viggiano L, De Gara L. et al. Genetic buffering of cyclic AMP in Arabidopsis thaliana compromises the plant immune response triggered by an avirulent strain of Pseudomonas syringae pv. tomato. Plant J. 2019;98(4):590–606. doi:10.1111/tpj.14275.
   PubMed Web of Science ®Google Scholar
• Beavo JA, Brunton LL. Cyclic nucleotide research — still expanding after half a century. Nat Rev Mol Cell Biol. 2002;3(9):710–717. doi:10.1038/nrm911.
   PubMed Web of Science ®Google Scholar
• Schena M, Lloyd AM, Davis RW. A steroid-inducible gene expression system for plant cells. Proc Natl Acad Sci U S A. 1991;88(23):10421–10425. doi:10.1073/pnas.88.23.10421.
   PubMed Web of Science ®Google Scholar
• McNellis TW, Mudgett MB, Li K, Aoyama T, Horvath D, Chua NH, Staskawicz BJ. Glucocorticoid-inducible expression of a bacterial avirulence gene in transgenic Arabidopsis induces hypersensitive cell death. Plant Journal. 1998;14(2):247–257. doi:10.1046/j.1365-313X.1998.00106.x.
   PubMed Web of Science ®Google Scholar
• Brutting C, Schafer M, Vankova R, Gase K, Baldwin IT, Meldau S. Changes in cytokinins are sufficient to alter developmental patterns of defense metabolites in Nicotiana attenuata. Plant Journal. 2017;89(1):15–30. doi:10.1111/tpj.13316.
   PubMed Web of Science ®Google Scholar
• Xu Y, Prunet N, Gan ES, Wang Y, Stewart D, Wellmer F, Huang J, Yamaguchi N, Tatsumi Y, Kojima M. et al. SUPERMAN regulates floral whorl boundaries through control of auxin biosynthesis. EMBO J. 2018;37(11):e97499. doi:10.15252/embj.201797499.
   PubMed Web of Science ®Google Scholar
• Lee DJ, Park JW, Lee HW, Kim J. Genome-wide analysis of the auxin-responsive transcriptome downstream of iaa1 and its expression analysis reveal the diversity and complexity of auxin-regulated gene expression. J Exp Bot. 2009;60(13):3935–3957. doi:10.1093/jxb/erp230.
   PubMed Web of Science ®Google Scholar
• Park JY, Kim HJ, Kim J. Mutation in domain II of IAA1 confers diverse auxin-related phenotypes and represses auxin-activated expression of Aux/IAA genes in steroid regulator-inducible system. Plant Journal. 2002;32(5):669–683. doi:10.1046/j.1365-313X.2002.01459.x.
   PubMed Web of Science ®Google Scholar
• Amirsadeghi S, McDonald AE, Vanlerberghe GC. A glucocorticoid-inducible gene expression system can cause growth defects in tobacco. Planta. 2007;226(2):453–463. doi:10.1007/s00425-007-0495-1.
   PubMed Web of Science ®Google Scholar
• Kang HG, Fang Y, Singh KB. A glucocorticoid-inducible transcription system causes severe growth defects in Arabidopsis and induces defense-related genes. Plant Journal. 1999;20(1):127–133. doi:10.1046/j.1365-313X.1999.00575.x.
   PubMed Web of Science ®Google Scholar
• Azhar S, Murti CR. Effect of indole-3-acetic acid on the synthesis of cyclic 3′–5′ adenosine phosphate by Bengal gram seeds. Biochem Biophys Res Commun. 1971;43(1):58–64. doi:10.1016/S0006-291X(71)80085-2.
   PubMed Web of Science ®Google Scholar
• Kamisaka S, Masuda Y. Stimulation of auxin-induced cell expansion in plant tissue by cyclic 3’,5‘–adenosine monophosphate. Naturwissenschaften. 1970;57(11):546. doi:10.1007/BF00625331.
   PubMedGoogle Scholar
• Chakraborty S, Toyota M, Moeder W, Chin K, Fortuna A, Champigny M, Vanneste S, Gilroy S, Beeckman T, Nambara E. et al. CYCLIC NUCLEOTIDE-GATED ION CHANNEL 2 modulates auxin homeostasis and signaling. Plant Physiol. 2021;187(3):1690–1703. doi:10.1093/plphys/kiab332.
   PubMed Web of Science ®Google Scholar
• Zhao J, Peng S, Cui H, Li P, Li T, Liu L, Zhang H, Tian Z, Shang H, Xu R. et al. Dynamic expression, differential regulation and functional diversity of the CNGC family genes in cotton. Int J Mol Sci. 2022;23(4):2041. doi:10.3390/ijms23042041.
   PubMed Web of Science ®Google Scholar
• Duszyn M, Swiezawska B, Szmidt–Jaworska A, Jaworski K. Cyclic nucleotide gated channels (CNGCs) in plant signalling – current knowledge and perspectives. J Plant Physiol. 2019;241:153035. doi:10.1016/j.jplph.2019.153035.
   PubMed Web of Science ®Google Scholar
• Parker T, Wang KW, Manning D, Dart C. Soluble adenylyl cyclase links Ca2+ entry to Ca2+/cAMP-response element binding protein (CREB) activation in vascular smooth muscle. Sci Rep. 2019;9(1):7317. doi:10.1038/s41598-019-43821-3.
   PubMedGoogle Scholar
• Grant MR, Jones JD. Hormone (dis)harmony moulds plant health and disease. Sci. 2009;324(5928):750–752. doi:10.1126/science.1173771.
   PubMed Web of Science ®Google Scholar
• Suzuki M, Yamazaki C, Mitsui M, Kakei Y, Mitani Y, Nakamura A, Ishii T, Soeno K, Shimada Y. Transcriptional feedback regulation of YUCCA genes in response to auxin levels in Arabidopsis. Plant Cell Rep. 2015;34(8):1343–1352. doi:10.1007/s00299-015-1791-z.
   PubMed Web of Science ®Google Scholar
• Lu M, Zhang Y, Tang S, Pan J, Yu Y, Han J, Li Y, Du X, Nan Z, Sun Q. et al. AtCNGC2 is involved in jasmonic acid-induced calcium mobilization. J Exp Bot. 2016;67(3):809–819. doi:10.1093/jxb/erv500.
   PubMed Web of Science ®Google Scholar
• Jin X-C, Wu W-H. Involvement of cyclic AMP in ABA- and Ca2+-mediated signal transduction of stomatal regulation in Vicia faba. Plant Cell Physiol. 1999;40(11):1127–1133. doi:10.1093/oxfordjournals.pcp.a029497.
   Web of Science ®Google Scholar
• Zhao Y, Liu Y, Ji X, Sun J, Lv S, Yang H, Zhao X, Hu X. Physiological and proteomic analyses reveal cAMP-regulated key factors in maize root tolerance to heat stress in maize root tolerance to heat stress. Food Energy Secur. 2021;10(4):e309. doi:10.1002/fes3.309.
   Web of Science ®Google Scholar
• Jiang J, Fan LW, Wu WH. Evidences for involvement of endogenous cAMP in Arabidopsis defense responses to Verticillium toxins. Cell Res. 2005;15(8):585–592. doi:10.1038/sj.cr.7290328.
   PubMed Web of Science ®Google Scholar
• Altmann M, Altmann S, Rodriguez PA, Weller B, Elorduy Vergara L, Palme J, Marín-de la Rosa N, Sauer M, Wenig M, Villaécija-Aguilar JA. et al. Extensive signal integration by the phytohormone protein network. Nature. 2020;583(7815):271–276. doi:10.1038/s41586-020-2460-0.
   PubMed Web of Science ®Google Scholar
• Yue X, Li XG, Gao XQ, Zhao XY, Dong YX, Zhou C. The Arabidopsis phytohormone crosstalk network involves a consecutive metabolic route and circular control units of transcription factors that regulate enzyme-encoding genes. BMC Syst Biol. 2016;10(1):87. doi:10.1186/s12918-016-0333-9.
   PubMedGoogle Scholar
• Mangat BS, Janjua S. Cyclic nucleotides and in vitro plant cultures: I. Induction of organogenesis in tobacco (Nicotiana tabacum) callus cultures. J Exp Biol. 1987;38(12):2059–2067. doi:10.1093/jxb/38.12.2059.
   Google Scholar
• Mano Y, Nemoto K. The pathway of auxin biosynthesis in plants. J Exp Bot. 2012;63(8):2853–2872. doi:10.1093/jxb/ers091.
   PubMed Web of Science ®Google Scholar
• Wang B, Chu J, Yu T, Xu Q, Sun X, Yuan J, Xiong G, Wang G, Wang Y, Li J. et al. Tryptophan-independent auxin biosynthesis contributes to early embryogenesis in Arabidopsis. Proc Natl Acad Sci U S A. 2015;112(15):4821–4826. doi:10.1073/pnas.1503998112.
   PubMed Web of Science ®Google Scholar
• Liu H, Timko MP. Jasmonic acid signaling and molecular crosstalk with other phytohormones. Int J Mol Sci. 2021;22(6):2914. doi:10.3390/ijms22062914.
   PubMed Web of Science ®Google Scholar
• Luo P, Di D, Wu L, Yang J, Lu Y, Shi W. MicroRNAs are involved in regulating plant development and stress response through fine-tuning of TIR1/AFB-dependent auxin signaling. Int J Mol Sci. 2022;23(1):510. doi:10.3390/ijms23010510.
   PubMed Web of Science ®Google Scholar
• Di DW, Zhang C, Luo P, An CW, Guo GQ. The biosynthesis of auxin: how many paths truly lead to IAA? Plant Growth Regul. 2016;78(3):275–285. doi:10.1007/s10725-015-0103-5.
   Web of Science ®Google Scholar
• Bak S, Tax FE, Feldmann KA, Galbraith DW, Feyereisen R. CYP83B1, a cytochrome P450 at the metabolic branch point in auxin and indole glucosinolate biosynthesis in Arabidopsis. Plant Cell. 2001;13(1):101–111. doi:10.1105/tpc.13.1.101.
   PubMed Web of Science ®Google Scholar
• Barlier I, Kowalczyk M, Marchant A, Ljung K, Bhalerao R, Bennett M, Sandberg G, Bellini C. The SUR2 gene of Arabidopsis thaliana encodes the cytochrome P450 CYP83B1, a modulator of auxin homeostasis. Proc Natl Acad Sci U S A. 2000;97(26):14819–14824. doi:10.1073/pnas.260502697.
   PubMed Web of Science ®Google Scholar
• Omelyanchuk NA, Kovrizhnykh VV, Oshchepkova EA, Pasternak T, Palme K, Mironova VV. A detailed expression map of the PIN1 auxin transporter in Arabidopsis thaliana root. BMC Plant Biol. 2016;16(Suppl 1):5. doi:10.1186/s12870-015-0685-0.
   PubMedGoogle Scholar
• Paque S, Weijers D. Q&A: Auxin: the plant molecule that influences almost anything. BMC Biol. 2016;14(1):67. doi:10.1186/s12915-016-0291-0.
   PubMedGoogle Scholar
• Wani SH, Kumar V, Shriram V, Sah SK. Phytohormones and their metabolic engineering for abiotic stress tolerance in crop plants. Crop J. 2016;4(3):162–176. doi:10.1016/j.cj.2016.01.010.
   Google Scholar
• Ali S, Ganai BA, Kamili AN, Bhat AA, Mir ZA, Bhat JA, Tyagi A, Islam ST, Mushtaq M, Yadav P. et al. Pathogenesis-related proteins and peptides as promising tools for engineering plants with multiple stress tolerance. Microbiol Res. 2018;212–213:29–37. doi:10.1016/j.micres.2018.04.008.
   PubMed Web of Science ®Google Scholar
• Kurkela S, Borg-Franck M. Structure and expression of kin2, one of two cold- and ABA-induced genes of Arabidopsis thaliana. Plant Mol Biol. 1992;19(4):689–692. doi:10.1007/BF00026794.
   PubMed Web of Science ®Google Scholar
• Hoth S, Morgante M, Sanchez JP, Hanafey MK, Tingey SV, Chua NH. Genome-wide gene expression profiling in Arabidopsis thaliana reveals new targets of abscisic acid and largely impaired gene regulation in the abi1–1 mutant. J Cell Sci. 2002;115(Pt 24):4891–4900. doi:10.1242/jcs.00175.
   PubMed Web of Science ®Google Scholar
• Stepanova AN, Robertson–Hoyt J, Yun J, Benavente LM, Xie DY, Dolezal K, Schlereth A, Jürgens G, Alonso JM. TAA1-mediated auxin biosynthesis is essential for hormone crosstalk and plant development. Cell. 2008;133(1):177–191. doi:10.1016/j.cell.2008.01.047.
   PubMed Web of Science ®Google Scholar
• Nguyen TC, Obermeier C, Friedt W, Abrams SR, Snowdon RJ. Disruption of germination and seedling development in Brassica napus by mutations causing severe seed hormonal imbalance. Front Plant Sci. 2016;7:322. doi:10.3389/fpls.2016.00322.
   PubMed Web of Science ®Google Scholar
• Yang J, Duan G, Li C, Liu L, Han G, Zhang Y, Wang C. The crosstalks between jasmonic acid and other plant hormone signaling highlight the involvement of jasmonic acid as a core component in plant response to biotic and abiotic stresses front plant sci. Front Plant Sci. 2019;10:1349. doi:10.3389/fpls.2019.01349.
   PubMed Web of Science ®Google Scholar
• Liu X, Zhang H, Zhao Y, Feng Z, Li Q, Yang HQ, Luan S, Li J, He Z-H. Auxin controls seed dormancy through stimulation of abscisic acid signaling by inducing ARF-mediated ABI3 activation in Arabidopsis. Proc Natl Acad Sci U S A. 2013;110(38):15485–15490. doi:10.1073/pnas.1304651110.
   PubMed Web of Science ®Google Scholar
• Boter M, Calleja–Cabrera J, Carrera–Castaño G, Wagner G, Hatzig SV, Snowdon RJ, Legoahec L, Bianchetti G, Bouchereau A, Nesi N. et al. An integrative approach to analyze seed germination in Brassica napus. Front Plant Sci. 2019;10:1342. doi:10.3389/fpls.2019.01342.
   PubMed Web of Science ®Google Scholar
• Liu L, Liu F, Chu J, Yi X, Fan W, Tang T, Chen G, Guo Q, Zhao X. A transcriptome analysis reveals a role for the indole GLS-linked auxin biosynthesis in secondary dormancy in rapeseed (Brassica napus L.). BMC Plant Biol. 2019;19(1):264. doi:10.1186/s12870-019-1866-z.
   PubMedGoogle Scholar
• Song JB, Shu XX, Shen Q, Li BW, Song J, Yang ZM, Raman H. Altered fruit and seed development of transgenic rapeseed (Brassica napus) over-expressing MicroRNA394. PloS ONE. 2015;10(5):e0125427. doi:10.1371/journal.pone.0125427.
   PubMed Web of Science ®Google Scholar
• Robert HS. Molecular communication for coordinated seed and fruit development: what can we learn from auxin and sugars? Int J Mol Sci. 2019;20(4):936. doi:10.3390/ijms20040936.
   PubMed Web of Science ®Google Scholar
• Tabeta H, Watanabe S, Fukuda K, Gunji S, Asaoka M, Hirai MY, Seo M, Tsukaya H, Ferjani A. An auxin signaling network translates low-sugar-state input into compensated cell enlargement in the fugu5 cotyledon. PloS Genet. 2021;17(8):e1009674. doi:10.1371/journal.pgen.1009674.
   PubMed Web of Science ®Google Scholar
• Bak S, Feyereisen R. The involvement of two p450 enzymes, CYP83B1 and CYP83A1, in auxin homeostasis and glucosinolate biosynthesis. Plant Physiol. 2001;127(1):108–118. doi:10.1104/pp.127.1.108.
   PubMed Web of Science ®Google Scholar
• Petrásek J, Friml J. Auxin transport routes in plant development. Development. 2009;136(16):2675–2688. doi:10.1242/dev.030353.
   PubMed Web of Science ®Google Scholar
• Chen Q, Dai X, De-Paoli H, Cheng Y, Takebayashi Y, Kasahara H, Kamiya Y, Zhao Y. Auxin overproduction in shoots cannot rescue auxin deficiencies in Arabidopsis roots. Plant Cell Physiol. 2014;55(6):1072–1079. doi:10.1093/pcp/pcu039.
   PubMed Web of Science ®Google Scholar
• Brumos J, Robles LM, Yun J, Vu TC, Jackson S, Alonso JM, Stepanova AN. Local auxin biosynthesis is a key regulator of plant development. Dev Cell. 2018;47(3):306–318.e5. doi:10.1016/j.devcel.2018.09.022.
   PubMed Web of Science ®Google Scholar
• Teale WD, Paponov IA, Palme K. Auxin in action: signalling, transport and the control of plant growth and development. Nat Rev Mol Cell Biol. 2006;7(11):847–859. doi:10.1038/nrm2020.
   PubMed Web of Science ®Google Scholar
• Pacheco-Villalobos D, Sankar M, Ljung K, Hardtke CS, Yu H. Disturbed local auxin homeostasis enhances cellular anisotropy and reveals alternative wiring of auxin-ethylene crosstalk in Brachypodium distachyon seminal roots. PloS Genet. 2013;9(6):e1003564. doi:10.1371/journal.pgen.1003564.
   PubMed Web of Science ®Google Scholar
• Deb Y, Marti D, Frenz M, Kuhlemeier C, Reinhardt D. Phyllotaxis involves auxin drainage through leaf primordia. Development. 2015;142(11):1992–2001. doi:10.1242/dev.121244.
   PubMed Web of Science ®Google Scholar
• Fujino K, Matsuda Y, Ozawa K, Nishimura T, Koshiba T, Fraaije MW, Sekiguchi H. NARROW LEAF 7 controls leaf shape mediated by auxin in rice. Mol Genet Genomics. 2008;279(5):499–507. doi:10.1007/s00438-008-0328-3.
   PubMed Web of Science ®Google Scholar
• Hentrich M, Böttcher C, Düchting P, Cheng Y, Zhao Y, Berkowitz O, Masle J, Medina J, Pollmann S. The jasmonic acid signaling pathway is linked to auxin homeostasis through the modulation of YUCCA8 and YUCCA9 gene expression. Plant Journal. 2013;74(4):626–637. doi:10.1111/tpj.12152.
   PubMed Web of Science ®Google Scholar
• Zhao B, Liu Q, Wang B, Yuan F. Roles of phytohormones and their signaling pathways in leaf development and stress responses. J Agric Food Chem. 2021;69(12):3566–3584. doi:10.1021/acs.jafc.0c07908.
   PubMed Web of Science ®Google Scholar
• Egamberdieva D, Wirth SJ, Alqarawi AA, Abd Allah EF, Hashem A. Phytohormones and beneficial microbes: essential components for plants to balance stress and fitness. Front Microbiol. 2017;8:2104. doi:10.3389/fmicb.2017.02104.
   PubMed Web of Science ®Google Scholar
• Irving HR, Cahill DM, Gehring C. Moonlighting proteins and their role in the control of signaling microenvironments, as exemplified by cGMP and phytosulfokine receptor 1 (PSKR1). Front Plant Sci. 2018;9:415. doi:10.3389/fpls.2018.00415.
   PubMed Web of Science ®Google Scholar