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Emerging seasonal and pandemic influenza infections

Influenza D virus infection in China, 2022–2023

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Article: 2343907 | Received 14 Dec 2023, Accepted 11 Apr 2024, Published online: 15 May 2024

References

  • Hause BM, Ducatez M, Collin EA, et al. Isolation of a novel swine influenza virus from Oklahoma in 2011 which is distantly related to human influenza C viruses. PLoS Pathog. 2013;9:e1003176.
  • Hause BM, Collin EA, Liu R, et al. Characterization of a novel influenza virus in cattle and swine: proposal for a new genus in the Orthomyxoviridae family. mBio. 2014;5:e00031-14.
  • Liu R, Sheng Z, Huang C, et al. Influenza D virus. Curr Opin Virol. 2020;44:154–161. doi:10.1016/j.coviro.2020.08.004
  • Yu J, Li F, Wang D. The first decade of research advances in influenza D virus. J Gen Virol. 2021;102:jgv001529. doi: 10.1099/jgv.0.001529.
  • Guan M, Jacobson O, Sarafianos G, et al. Exposure of white-tailed deer in North America to influenza D virus. Virology. 2022;573:111–117. doi:10.1016/j.virol.2022.06.007
  • Nedland H, Wollman J, Sreenivasan C, et al. Serological evidence for the co-circulation of two lineages of influenza D viruses in equine populations of the Midwest United States. Zoonoses Public Health. 2018;65:e148–e154.
  • Sanogo IN, Kouakou C, Batawui K, et al. Serological surveillance of influenza D virus in ruminants and swine in West and East Africa, 2017-2020. Viruses. 2021;13:1749. doi: 10.3390/v13091749.
  • Saegerman C, Gaudino M, Savard C, et al. Influenza D virus in respiratory disease in Canadian, province of Quebec, cattle: relative importance and evidence of new reassortment between different clades. Transbound Emerg Dis. 2022;69:1227–1245. doi:10.1111/tbed.14085
  • Lim EH, Lim SI, Kim MJ, et al. First detection of influenza D virus infection in cattle and pigs in the Republic of Korea. Microorganisms. 2023;11:1751. doi: 10.3390/microorganisms11071751.
  • Molini U, Curini V, Jacobs E, Tongo E, Berjaoui S, Hemberger MY, Puglia I, Jago M, Khaiseb S, Cattoli G, Dundon WG, Lorusso A, Di Giallonardo F. 2022. First influenza D virus full-genome sequence retrieved from livestock in Namibia, Africa. Acta Trop 232:106482.
  • da Silva MS, Mosena ACS, Baumbach L, et al. Cattle influenza D virus in Brazil is divergent from established lineages. Arch Virol. 2022;167:1181–1184. doi:10.1007/s00705-022-05416-8
  • Alvarez I, Hagglund S, Naslund K, et al. Detection of influenza D-specific antibodies in bulk tank milk from Swedish dairy farms. Viruses. 2023;15:829. doi: 10.3390/v15040829.
  • Goecke NB, Liang Y, Otten ND, et al. Characterization of influenza D virus in Danish calves. Viruses. 2022;14:423. doi: 10.3390/v14020423.
  • Schrauwen EJ, Fouchier RA. Host adaptation and transmission of influenza A viruses in mammals. Emerg Microbes Infect. 2014;3:e9. doi: 10.1038/emi.2014.9.
  • White SK, Ma W, McDaniel CJ, et al. Serologic evidence of exposure to influenza D virus among persons with occupational contact with cattle. J Clin Virol. 2016;81:31–33. doi:10.1016/j.jcv.2016.05.017
  • Trombetta CM, Marchi S, Manini I, et al. Influenza D virus: serological evidence in the Italian population from 2005 to 2017. Viruses. 2019;12:30. doi: 10.3390/v12010030.
  • Trombetta CM, Montomoli E, Di Bartolo I, et al. Detection of antibodies against influenza D virus in swine veterinarians in Italy in 2004. J Med Virol. 2022;94:2855–2859. doi:10.1002/jmv.27466
  • Vega-Rodriguez W, Ly H. Epidemiological, serological, and genetic evidence of influenza D virus infection in humans: Is it a justifiable cause for concern? Virulence. 2023;14:2150443. doi:10.1080/21505594.2022.2150443
  • Oliva J, Mettier J, Sedano L, et al. Murine model for the study of influenza D virus. J Virol. 2020;94:e01662-19. doi: 10.1128/JVI.01662-19.
  • Bailey ES, Choi JY, Zemke J, et al. Molecular surveillance of respiratory viruses with bioaerosol sampling in an airport. Trop Dis Travel Med Vaccines. 2018;4:11. doi:10.1186/s40794-018-0071-7
  • Choi JY, Zemke J, Philo SE, et al. Aerosol sampling in a hospital emergency room setting: A complementary surveillance method for the detection of respiratory viruses. Front Public Health. 2018;6:174. doi:10.3389/fpubh.2018.00174
  • Ferguson L, Olivier AK, Genova S, et al. Pathogenesis of influenza D virus in cattle. J Virol. 2016;90:5636–5642. doi:10.1128/JVI.03122-15
  • Salem E, Hagglund S, Cassard H, et al. Pathogenesis, host innate immune response, and aerosol transmission of influenza D virus in cattle. J Virol. 2019;93:e01853-18. doi: 10.1128/JVI.01853-18.
  • Lee J, Wang L, Palinski R, et al. Comparison of pathogenicity and transmissibility of influenza B and D viruses in pigs. Viruses. 2019;11:905. doi: 10.3390/v11100905.
  • Hause BM, Huntimer L, Falkenberg S, et al. An inactivated influenza D virus vaccine partially protects cattle from respiratory disease caused by homologous challenge. Vet Microbiol. 2017;199:47–53. doi:10.1016/j.vetmic.2016.12.024
  • Zhang X, Outlaw C, Olivier AK, et al. Pathogenesis of co-infections of influenza D virus and Mannheimia haemolytica in cattle. Vet Microbiol. 2019;231:246–253. doi:10.1016/j.vetmic.2019.03.027
  • Mitra N, Cernicchiaro N, Torres S, et al. Metagenomic characterization of the virome associated with bovine respiratory disease in feedlot cattle identified novel viruses and suggests an etiologic role for influenza D virus. J Gen Virol. 2016;97:1771–1784. doi:10.1099/jgv.0.000492
  • Ng TF, Kondov NO, Deng X, et al. A metagenomics and case-control study to identify viruses associated with bovine respiratory disease. J Virol. 2015;89:5340–5349. doi:10.1128/JVI.00064-15
  • Zhang M, Hill JE, Fernando C, et al. Respiratory viruses identified in western Canadian beef cattle by metagenomic sequencing and their association with bovine respiratory disease. Transbound Emerg Dis. 2019;66:1379–1386. doi:10.1111/tbed.13032
  • Cool K, Gaudreault NN, Trujillo JD, et al. Experimental co-infection of calves with SARS-CoV-2 delta and omicron variants of concern. Emerg Microbes Infect. 2024;13:2281356. doi:10.1080/22221751.2023.2281356
  • Lion A, Secula A, Rancon C, et al. Enhanced pathogenesis caused by influenza D virus and Mycoplasma bovis coinfection in calves: a disease severity linked with overexpression of IFN-gamma as a Key player of the enhanced innate immune response in lungs. Microbiol Spectr. 2021;9:e0169021.
  • Gaudino M, Lion A, Sagne E, et al. The activation of the RIG-I/MDA5 signaling pathway upon influenza D virus infection impairs the pulmonary proinflammatory response triggered by Mycoplasma bovis superinfection. J Virol. 2023;97:e0142322.
  • Martin BE, Sun H, Carrel M, et al. Feral swine in the United States have been exposed to both avian and swine influenza A viruses. Appl Environ Microbiol. 2017;83:e01346-17. doi: 10.1128/AEM.01346-17.
  • Yesilbag K, Toker EB, Ates O. Recent strains of influenza D virus create a new genetic cluster for European strains. Microb Pathog. 2022;172:105769. doi:10.1016/j.micpath.2022.105769
  • Huang C, Yu J, Hause BM, et al. Emergence of new phylogenetic lineage of influenza D virus with broad antigenicity in California, United States. Emerg Microbes Infect. 2021;10:739–742. doi:10.1080/22221751.2021.1910078
  • Murakami S, Sato R, Ishida H, et al. Influenza D virus of new phylogenetic lineage, Japan. Emerg Infect Dis. 2020;26:168–171. doi:10.3201/eid2604.191161
  • Yu J, Li T, Wen Z, et al. Identification of D/Yama2019 lineage-like influenza D virus in Chinese cattle. Front Vet Sci. 2022;9:939456. doi:10.3389/fvets.2022.939456
  • Collin EA, Sheng Z, Lang Y, et al. Cocirculation of two distinct genetic and antigenic lineages of proposed influenza D virus in cattle. J Virol. 2015;89:1036–1042. doi:10.1128/JVI.02718-14
  • Mekata H, Yamamoto M, Hamabe S, et al. Molecular epidemiological survey and phylogenetic analysis of bovine influenza D virus in Japan. Transbound Emerg Dis. 2018;65:e355–e360.
  • Xu Y, Liang H, Wen H. Frequent reassortment and potential recombination shape the genetic diversity of influenza D viruses. J Infect. 2021;82:e36–e38. doi:10.1016/j.jinf.2020.11.021
  • He WT, Lu M, Xing G, et al. Emergence and adaptive evolution of influenza D virus. Microb Pathog. 2021;160:105193. doi:10.1016/j.micpath.2021.105193
  • Jiang WM, Wang SC, Peng C, et al. Identification of a potential novel type of influenza virus in Bovine in China. Virus Genes. 2014;49:493–496. doi:10.1007/s11262-014-1107-3
  • Zhai SL, Zhang H, Chen SN, et al. Influenza D virus in animal species in Guangdong Province, Southern China. Emerg Infect Dis. 2017;23:1392–1396. doi: 10.3201/eid2308.170059.
  • Yu J, Huang C, Sheng Z, et al. Identification of One critical amino acid residue of the nucleoprotein as a determinant for in vitro replication fitness of influenza D virus. J Virol. 2021;95:e0097121.
  • Yu J, Liu R, Zhou B, et al. Development and characterization of a reverse-genetics system for influenza D virus. J Virol. 2019;93:e01186-19. doi: 10.1128/JVI.01186-19.
  • Kumar S, Stecher G, Li M, et al. Mega X: molecular evolutionary genetics analysis across computing platforms. Mol Biol Evol. 2018;35:1547–1549. doi:10.1093/molbev/msy096
  • Wan XF, Ferguson L, Oliva J, et al. Limited cross-protection provided by prior infection contributes to high prevalence of influenza D viruses in cattle. J Virol. 2020;94:e00240-20. doi: 10.1128/JVI.00240-20.
  • Silveira S, Falkenberg SM, Kaplan BS, et al. Serosurvey for influenza D virus exposure in cattle, United States, 2014-2015. Emerg Infect Dis. 2019;25:2074–2080.
  • Snoeck CJ, Oliva J, Pauly M, et al. Influenza D virus circulation in cattle and swine, Luxembourg, 2012-2016. Emerg Infect Dis. 2018;24:1388–1389.
  • O'Donovan T, Donohoe L, Ducatez MF, et al. Seroprevalence of influenza D virus in selected sample groups of Irish cattle, sheep and pigs. Ir Vet J. 2019;72:11. doi:10.1186/s13620-019-0150-8
  • Gaudino M, Moreno A, Snoeck CJ, et al. Emerging influenza D virus infection in European livestock as determined in serology studies: Are we underestimating its spread over the continent? Transbound Emerg Dis. 2021;68:1125–1135. doi:10.1111/tbed.13812
  • Horimoto T, Hiono T, Mekata H, et al. Nationwide distribution of bovine influenza D virus infection in Japan. PLoS One. 2016;11:e0163828.
  • Murakami S, Odagiri T, Melaku SK, et al. Influenza D virus infection in dromedary camels, Ethiopia. Emerg Infect Dis. 2019;25:1224–1226. doi:10.3201/eid2506.181158
  • Quast M, Sreenivasan C, Sexton G, et al. Serological evidence for the presence of influenza D virus in small ruminants. Vet Microbiol. 2015;180:281–285. doi:10.1016/j.vetmic.2015.09.005
  • Oliva J, Eichenbaum A, Belin J, et al. Serological evidence of influenza D virus circulation Among cattle and small ruminants in France. Viruses. 2019;11:516. doi: 10.3390/v11060516.