181
Views
2
CrossRef citations to date
0
Altmetric
ORIGINAL RESEARCH

Diagnostic Performance of Metagenomic Next-Generation Sequencing in Central Nervous System Cryptococcosis Using Cerebrospinal Fluid

, , , , , & ORCID Icon show all
Pages 6175-6183 | Received 09 Jul 2023, Accepted 01 Sep 2023, Published online: 13 Sep 2023

References

  • Stott KE, Loyse A, Jarvis JN, et al. Cryptococcal meningoencephalitis: time for action. Lancet Infect Dis. 2021;21(9):e259–e271. doi:10.1016/S1473-3099(20)30771-4
  • Rajasingham R, Smith RM, Park BJ, et al. Global burden of disease of HIV-associated cryptococcal meningitis: an updated analysis. Lancet Infect Dis. 2017;17:873–881. doi:10.1016/S1473-3099(17)30243-8
  • Rajasingham R, Govender NP, Jordan A, et al. The global burden of HIV-associated cryptococcal infection in adults in 2020: a modelling analysis. Lancet Infect Dis. 2022;22(12):1748–1755. doi:10.1016/S1473-3099(22)00499-6
  • Abassi M, Boulware DR, Rhein J. Cryptococcal Meningitis: diagnosis and Management Update. Curr Trop Med Rep. 2015;2(2):90–99. doi:10.1007/s40475-015-0046-y
  • Kambugu A, Meya DB, Rhein J, et al. Outcomes of cryptococcal meningitis in Uganda before and after the availability of highly active antiretroviral therapy. Clin Infect Dis. 2008;46:1694–1701. doi:10.1086/587667
  • Boulware DR, Rolfes MA, Rajasingham R, et al. Multisite validation of cryptococcal antigen lateral flow assay and quantification by laser thermal contrast. Emerg Infect Dis. 2014;20:45–53. doi:10.3201/eid2001.130906
  • Makadzange AT, McHugh G. New approaches to the diagnosis and treatment of cryptococcal meningitis. Semin Neurol. 2014;34(1):47–60. doi:10.1055/s-0034-1372342
  • Góralska K, Blaszkowska J, Dzikowiec M. Neuroinfections caused by fungi. Infection. 2018;46(4):443–459. doi:10.1007/s15010-018-1152-2
  • Rajasingham R, Wake RM, Beyene T, Katende A, Letang E, Boulware DR. Cryptococcal meningitis diagnostics and screening in the era of point-of-care laboratory testing. J Clin Microbiol. 2019;57(1):e01238–18. doi:10.1128/JCM.01238-18
  • Temfack E, Rim JJB, Spijker R, et al. Cryptococcal antigen in serum and cerebrospinal fluid for detecting cryptococcal meningitis in adults living with human immunodeficiency virus: systematic review and meta-analysis of diagnostic test accuracy studies. Clin Infect Dis. 2021;72(7):1268–1278. doi:10.1093/cid/ciaa1243
  • Chiang AD, Dekker JP. From the pipeline to the bedside: advances and challenges in clinical metagenomics. J Infect Dis. 2020;221(Suppl 3):S331–S340. doi:10.1093/infdis/jiz151
  • Simner PJ, Miller S, Carroll KC. Understanding the promises and hurdles of metagenomic next-generation sequencing as a diagnostic tool for infectious diseases. Clin Infect Dis. 2018;66(5):778–788. doi:10.1093/cid/cix881
  • Zhang X, Chen H, Han D, Wu W. Clinical usefulness of metagenomic next-generation sequencing for Rickettsia and Coxiella burnetii diagnosis. Eur J Clin Microbiol Infect Dis. 2023;42(6):681–689. doi:10.1007/s10096-023-04586-w
  • Zhang Y, Cui P, Zhang HC, et al. Clinical application and evaluation of metagenomic next-generation sequencing in suspected adult central nervous system infection. J Transl Med. 2020;18(1):199. doi:10.1186/s12967-020-02360-6
  • Wilson MR, Sample HA, Zorn KC, et al. Clinical metagenomic sequencing for diagnosis of meningitis and encephalitis. N Engl J Med. 2019;380(24):2327–2340. doi:10.1056/NEJMoa1803396
  • Ramachandran PS, Ramesh A, Creswell FV, et al. Integrating central nervous system metagenomics and host response for diagnosis of tuberculosis meningitis and its mimics. Nat Commun. 2022;13(1):1675. doi:10.1038/s41467-022-29353-x
  • Xing XW, Zhang JT, Ma YB, Zheng N, Yang F, Yu SY. Apparent performance of metagenomic next-generation sequencing in the diagnosis of cryptococcal meningitis: a descriptive study. J Med Microbiol. 2019;68(8):1204–1210. doi:10.1099/jmm.0.000994
  • Gan Z, Liu J, Wang Y, et al. Performance of metagenomic next-generation sequencing for the diagnosis of cryptococcal meningitis in HIV-negative patients. Front Cell Infect Microbiol. 2022;12:831959. doi:10.3389/fcimb.2022.831959
  • Jin K, Wang X, Qin L, et al. Nanopore sequencing of cerebrospinal fluid of three patients with cryptococcal meningitis. Eur J Med Res. 2022;27(1):1. doi:10.1186/s40001-021-00625-4
  • Donnelly JP, Chen SC, Kauffman CA, et al. Revision and update of the consensus definitions of invasive fungal disease from the European Organization for Research and Treatment of Cancer and the Mycoses Study Group Education and Research Consortium. Clin Infect Dis. 2020;71(6):1367–1376. doi:10.1093/cid/ciz1008
  • Han D, Yu F, Zhang D, et al. The real-world clinical impact of plasma mNGS testing: an observational study. Microbiol Spectr. 2023;11(2):e398322. doi:10.1128/spectrum.03983-22
  • Jarvis JN, Bicanic T, Loyse A, et al. Determinants of mortality in a combined cohort of 501 patients with HIV-associated cryptococcal meningitis: implications for improving outcomes. Clin Infect Dis. 2014;58:736–745. doi:10.1093/cid/cit794
  • Liu ZY, Wang GQ, Zhu LP, et al. <atl>Expert consensus on the diagnosis and treatment of cryptococcal meningitis. Zhonghua Nei Ke Za Zhi. 2018;57(5):317–323. doi:10.3760/cma.j.issn.0578-1426.2018.05.003.