Novel method for classification of prion diseases by detecting PrP^res signal patterns from formalin-fixed paraffin-embedded samples

References

• Prusiner SB. The prion diseases. Brain Pathology. 1998;8(3):499–513. doi: 10.1111/j.1750-3639.1998.tb00171.x
   PubMed Web of Science ®Google Scholar
• Pan KM, Baldwin M, Nguyen J, et al. Conversion of alpha-helices into beta-sheets features in the formation of the scrapie prion proteins. Proc Natl Acad Sci U S A. 1993;90(23):10962–10966. doi: 10.1073/pnas.90.23.10962
   PubMed Web of Science ®Google Scholar
• Parchi P, Giese A, Capellari S, et al. Classification of sporadic Creutzfeldt-Jakob disease based on molecular and phenotypic analysis of 300 subjects. Ann Neurol. 1999;46(2):224–233. doi: 10.1002/1531-8249(199908)46:2<224:AID-ANA12>3.0.CO;2-W
   PubMed Web of Science ®Google Scholar
• Parchi P, Castellani R, Capellari S, et al. Molecular basis of phenotypic variability in sporadic Creutzfeldt-Jakob disease. Ann Neurol. 1996;39(6):767–778. doi: 10.1002/ana.410390613
   PubMed Web of Science ®Google Scholar
• Nozaki I, Hamaguchi T, Sanjo N, et al. Prospective 10-year surveillance of human prion diseases in Japan. Brain. 2010;133(10):3043–3057. doi: 10.1093/brain/awq216
   PubMedGoogle Scholar
• Iwasaki Y, Mori K, Ito M, et al. An autopsied case of V180I Creutzfeldt-Jakob disease presenting with panencephalopathic-type pathology and a characteristic prion protein type. Neuropathology. 2011;31(5):540–548. doi: 10.1111/j.1440-1789.2010.01192.x
   PubMed Web of Science ®Google Scholar
• Honda H, Ishii R, Hamano A, et al. Microsphere formation in a subtype of Creutzfeldt–Jakob disease with a V180I mutation and codon 129 MM polymorphism. Neuropathol Appl Neurobiol. 2013;39(7):844–848. doi: 10.1111/nan.12047
   PubMed Web of Science ®Google Scholar
• Piccardo P, Dlouhy SR, Lievens PM, et al. Phenotypic variability of Gerstmann-Sträussler-Scheinker disease is associated with prion protein heterogeneity. J Neuropathol Exp Neurol. 1998;57(10):979–988. doi: 10.1097/00005072-199810000-00010
   PubMed Web of Science ®Google Scholar
• Parchi P, Chen SG, Brown P, et al. Different patterns of truncated prion protein fragments correlate with distinct phenotypes in P102L Gerstmann–Sträussler–Scheinker disease. Proc Natl Acad Sci U S A. 1998;95(14):8322–8327. doi: 10.1073/pnas.95.14.8322
   PubMed Web of Science ®Google Scholar
• Mead S, Gandhi S, Beck J, et al. A novel prion disease associated with diarrhea and autonomic neuropathy. N Engl J Med. 2013;369(20):1904–1914. doi: 10.1056/NEJMoa1214747
   PubMed Web of Science ®Google Scholar
• Matsuzono K, Ikeda Y, Liu W, et al. A novel familial prion disease causing pan-autonomic-sensory neuropathy and cognitive impairment. Eur J Neurol. 2013;20(5):e67–9. doi: 10.1111/ene.12089
   PubMed Web of Science ®Google Scholar
• Honda H, Matsuzono K, Fushimi S, et al. C-Terminal-deleted prion protein fragment is a Major Accumulated Component of Systemic PrP deposits in hereditary prion disease with a 2-bp (CT) deletion in PRNP codon 178. J Neuropathol Exp Neurol. 2016;75(11):1008–1019. doi: 10.1093/jnen/nlw077
   PubMed Web of Science ®Google Scholar
• Kunkle RA, Nicholson EM, Lebepe-Mazur S, et al. Western blot detection of PrP Sc in archived paraffin-embedded brainstem from scrapie-affected sheep. J Vet Diagn Invest. 2008;20(4):522–526. doi: 10.1177/104063870802000421
   PubMed Web of Science ®Google Scholar
• Nicholson EM. Enrichment of PrPSc in formalin-fixed, paraffin-embedded tissues prior to analysis by Western blot. J Vet Diagn Invest. 2011;23(4):790–792. doi: 10.1177/1040638711407886
   PubMed Web of Science ®Google Scholar
• Dorj G, Okada H, Miyazawa K, et al. Retrospective analysis of sheep scrapie by western blotting with formalin-fixed paraffin-embedded (FFPE) tissues. J Vet Med Sci. 2012;74(9):1207–1210. doi: 10.1292/jvms.12-0037
   PubMed Web of Science ®Google Scholar
• Nakagaki T, Kaneko M, Satoh K, et al. Detection of prions in a cadaver for anatomical practice. N Engl J Med. 2022;386(23):2245–2246. doi: 10.1056/NEJMc2204116
   PubMed Web of Science ®Google Scholar
• Rodríguez-Rigueiro T, Valladares-Ayerbes M, Haz-Conde M, et al. A novel procedure for protein extraction from formalin-fixed paraffin-embedded tissues. Proteomics. 2011;11(12):2555–2559. doi: 10.1002/pmic.201000809
   PubMed Web of Science ®Google Scholar
• Inoue T, Hagiyama M, Yoneshige A, et al. Increased ectodomain shedding of cell adhesion molecule 1 from pancreatic islets in type 2 diabetic pancreata: correlation with hemoglobin A1c levels. PloS One. 2014;9(6):e100988. doi: 10.1371/journal.pone.0100988
   PubMed Web of Science ®Google Scholar
• Schulz-Schaeffer WJ, Tschöke S, Kranefuss N, et al. The paraffin-embedded tissue blot detects PrP(Sc) early in the incubation time in prion diseases. Am J Pathol. 2000;156(1):51–56. doi: 10.1016/S0002-9440(10)64705-0
   PubMed Web of Science ®Google Scholar
• Schulz-Schaeffer WJ, Fatzer R, Vandevelde M, et al. Detection of PrP(Sc) in subclinical BSE with the paraffin-embedded tissue (PET) blot. Arch Virol Suppl. 2000;16:173–180. doi: 10.1007/978-3-7091-6308-5_16
   Google Scholar
• Hofmann A, Wrede A, Jürgens-Wemheuer WM, et al. Prion type 2 selection in sporadic Creutzfeldt–Jakob disease affecting peripheral ganglia. Acta Neuropathol Commun. 2021;9(1):187. doi: 10.1186/s40478-021-01286-4
   PubMed Web of Science ®Google Scholar
• Kobayashi A, Sakuma N, Matsuura Y, et al. Experimental verification of a traceback phenomenon in prion infection. J Virol. 2010;84(7):3230–3238. doi: 10.1128/JVI.02387-09
   PubMed Web of Science ®Google Scholar
• Notari S, Strammiello R, Capellari S, et al. Characterization of truncated forms of abnormal prion protein in Creutzfeldt-Jakob disease. J Biol Chem. 2008;283(45):30557–30565. doi: 10.1074/jbc.M801877200
   PubMed Web of Science ®Google Scholar
• Nicholson EM, Kunkle RA, Hamir AN, et al. Detection of the disease-associated isoform of the prion protein in formalin-fixed tissues by Western blot. J Vet Diagn Invest. 2007;19(5):548–552. doi: 10.1177/104063870701900515
   PubMed Web of Science ®Google Scholar
• Ogami-Takamura K, Saiki K, Endo D, et al. The risk of Creutzfeldt–Jakob disease infection in cadaveric surgical training. Anat Sci Int. 2022;97(3):297–302. doi: 10.1007/s12565-022-00662-x
   PubMed Web of Science ®Google Scholar