HIV-1 CRF07_BC transmission dynamics in China: two decades of national molecular surveillance

References

• Feng Y, Takebe Y, Wei H, et al. Geographic origin and evolutionary history of China’s two predominant HIV-1 circulating recombinant forms, CRF07_BC and CRF08_BC. Sci Rep. 2016 Jan 14;6:19279.
   PubMed Web of Science ®Google Scholar
• Yin W, Hao Y, Sun X, et al. Scaling up the national methadone maintenance treatment program in China: achievements and challenges. Int J Epidemiol. 2010 Dec;39(Suppl. 2):ii29–ii37.
   PubMed Web of Science ®Google Scholar
• Yin Y, Liu Y, Zhu J, et al. The prevalence, temporal trends, and geographical distribution of HIV-1 subtypes among men who have sex with men in China: A systematic review and meta-analysis. Epidemiol Infect. 2019 Jan;147:e83.
   Web of Science ®Google Scholar
• He X, Xing H, Ruan Y, et al. A comprehensive mapping of HIV-1 genotypes in various risk groups and regions across China based on a nationwide molecular epidemiologic survey. PLoS One. 2012;7(10):e47289.
   PubMed Web of Science ®Google Scholar
• Mengze Gan AD, Kang R. Characteristics of inter-provincial transmission of newly reported HIV-1 infected people in 2018. Chin J AIDS STD. 2021 2021 Feb;27(2):115–120.
   Google Scholar
• Han X, An M, Zhang M, et al. Identification of 3 distinct HIV-1 founding strains responsible for expanding epidemic among men who have sex with men in 9 Chinese cities. J Acquir Immune Defic Syndr. 2013 Sep 1;64(1):16–24.
   Web of Science ®Google Scholar
• Li Z, Liao L, Feng Y, et al. Trends of HIV subtypes and phylogenetic dynamics among young men who have sex with men in China, 2009–2014. Sci Rep. 2015 Nov 18;5:16708.
   Web of Science ®Google Scholar
• Li X, Zang X, Ning C, et al. Molecular epidemiology of HIV-1 in Jilin province, northeastern China: emergence of a new CRF07_BC transmission cluster and intersubtype recombinants. PLoS One. 2014;9(10):e110738.
   Web of Science ®Google Scholar
• Li L, Lu X, Li H, et al. High genetic diversity of HIV-1 was found in men who have sex with men in Shijiazhuang, China. Infect Genet Evol. 2011 Aug;11(6):1487–1492.
   Web of Science ®Google Scholar
• Lyu P, Chen FF. National HIV/AIDS epidemic estimation and interpretation in China. Zhong Liu Xing Bing Xue Za Zhi. 2019 Oct 10;40(10):1191–1196.
   PubMedGoogle Scholar
• Zhuang X, Chen Y, Wu Z, et al. Analysis of hospitalization expenses of 610 HIV/AIDS patients in Nantong, China. BMC Health Serv Res. 2020 Aug 31;20(1):813.
   Web of Science ®Google Scholar
• Wertheim JO, Kosakovsky Pond SL, Forgione LA, et al. Social and genetic networks of HIV-1 transmission in New York city. PLoS Pathog. 2017 Jan;13(1):e1006000.
   PubMed Web of Science ®Google Scholar
• Oster AM, Wertheim JO, Hernandez AL, et al. Using molecular HIV surveillance data to understand transmission between subpopulations in the United States. J Acquir Immune Defic Syndr. 2015 Dec 1;70(4):444–451.
   PubMed Web of Science ®Google Scholar
• Han X, Zhao B, An M, et al. Molecular network-based intervention brings us closer to ending the HIV pandemic. Front Med. 2020 Apr;14(2):136–148.
   PubMed Web of Science ®Google Scholar
• Mej N. Power laws Pareto distributions and Zipf’s laws. Contemp Phys. 2005;46:323–351.
   Web of Science ®Google Scholar
• Clauset A, Shalizi C, Newman M. Power-law distributions in empirical data. SIAM Rev. 2007;51:661–703.
   Web of Science ®Google Scholar
• Gill MS, Lemey P, Faria NR, et al. Improving Bayesian population dynamics inference: a coalescent-based model for multiple loci. Mol Biol Evol. 2013 Mar;30(3):713–724.
   PubMed Web of Science ®Google Scholar
• Faria NR, Rambaut A, Suchard MA, et al. HIV epidemiology. The early spread and epidemic ignition of HIV-1 in human populations. Science. 2014 Oct 3;346(6205):56–61.
   PubMed Web of Science ®Google Scholar
• Han X, Dai D, Zhao B, et al. Genetic and epidemiologic characterization of HIV-1 infection in Liaoning province, China. J Acquir Immune Defic Syndr. 2010 Feb;53(Suppl. 1):S27–S33.
   Web of Science ®Google Scholar
• Wang W, Xu J, Jiang S, et al. The dynamic face of HIV-1 subtypes among men who have sex with men in Beijing, China. Curr HIV Res. 2011 Mar;9(2):136–139.
   Web of Science ®Google Scholar
• Liu J, Zhang C. Phylogeographic analyses reveal a crucial role of Xinjiang in HIV-1 CRF07_BC and HCV 3a transmissions in Asia. PLoS One. 2011;6(8):e23347.
   Web of Science ®Google Scholar
• Sun X, Lu F, Wu Z, et al. Evolution of information-driven HIV/AIDS policies in China. Int J Epidemiol. 2010 Dec;39(Suppl. 2):ii4–i13.
   PubMed Web of Science ®Google Scholar
• Harrigan PR, Little SJ, Kosakovsky Pond SL, et al. Using HIV networks to inform real time prevention interventions. PLoS One. 2014;9(6):e98443.
   Web of Science ®Google Scholar
• Ma L, Guo Y, Yuan L, et al. Phenotypic and genotypic characterization of human immunodeficiency virus type 1 CRF07_BC strains circulating in the Xinjiang province of China. Retrovirology. 2009 May 14;6:45.
   PubMed Web of Science ®Google Scholar
• Wu Y, Wang H, Ren X, et al. HIV-1 CRF07_BC with a seven amino acid deletion in the gag p6 region dominates in HIV-1-infected men who have sex with men in China. AIDS Res Hum Retroviruses. 2017 Sep;33(9):977–983.
   Web of Science ®Google Scholar
• Ruan Y, Jia Y, Zhang X, et al. Incidence of HIV-1, syphilis, hepatitis B, and hepatitis C virus infections and predictors associated with retention in a 12-month follow-up study among men who have sex with men in Beijing, China. J Acquir Immune Defic Syndr. 2009 Dec;52(5):604–610.
   Web of Science ®Google Scholar
• Li D, Li S, Liu Y, et al. HIV incidence among men who have sex with men in Beijing: a prospective cohort study. BMJ Open. 2012;2:6.
   Web of Science ®Google Scholar
• Li D, Yang X, Zhang Z, et al. Nitrite inhalants use and HIV infection among men who have sex with men in China. Biomed Res Int. 2014;2014:365261.
   Web of Science ®Google Scholar
• Ostrow DG, Plankey MW, Cox C, et al. Specific sex drug combinations contribute to the majority of recent HIV seroconversions among MSM in the MACS. J Acquir Immune Defic Syndr. 2009 Jul 1;51(3):349–355.
   PubMed Web of Science ®Google Scholar
• Elford J, Bolding G, Davis M, et al. Web-based behavioral surveillance among men who have sex with men: a comparison of online and offline samples in London, UK. J Acquir Immune Defic Syndr. 2004 Apr 1;35(4):421–426.
   PubMed Web of Science ®Google Scholar
• WeChat – wikipedia. Available from: https://en.wikipedia.org/wiki/WeChat.
   Google Scholar
• Grov C, Breslow AS, Newcomb ME, et al. Gay and bisexual men’s use of the internet: research from the 1990s through 2013. J Sex Res. 2014;51(4):390–409.
   PubMed Web of Science ®Google Scholar
• Stahlman S, Grosso A, Ketende S, et al. Characteristics of men who have sex with men in Southern Africa who seek sex online: a cross-sectional study. J Med Internet Res. 2015 May 25;17(5):e129.
   PubMed Web of Science ®Google Scholar
• An M, Han X, Xu J, et al. Reconstituting the epidemic history of HIV strain CRF01_AE among men who have sex with men (MSM) in Liaoning, northeastern China: implications for the expanding epidemic among MSM in China. J Virol. 2012 Nov;86(22):12402–6.
   Web of Science ®Google Scholar
• Fu R, Zhao J, Wu D, et al. A spatiotemporal meta-analysis of HIV/syphilis epidemic among men who have sex with men living in mainland China. BMC Infect Dis. 2018 Dec 12;18(1):652.
   Web of Science ®Google Scholar