Autophagy, Volume 20, Issue 4 (2024)

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Autophagy, Volume 20, Issue 4 (2024)

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Editor’s Corner

Editorial
Autophagy—the crossword puzzle
Daniel J. Klionsky
Pages: 717-719
Published online: 05 Mar 2024
AbstractforAutophagy—the crossword puzzle | Full Text | PDF (241.5 KB) | EPUB
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Review

Review Article
The nonautophagic functions of autophagy-related proteins
Jia-Ni Shang, Chen-Ge Yu, Rui Li, Yan Xi, Yue Jenny Jian, Nan Xu & Su Chen
Pages: 720-734
Published online: 08 Sep 2023
AbstractforThe nonautophagic functions of autophagy-related proteins | Full Text | References | PDF (1.4 MB) | EPUB
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Research Paper

Article
SMURF1 controls the PPP3/calcineurin complex and TFEB at a regulatory node for lysosomal biogenesis
Qin Xia, Hanfei Zheng, Yang Li, Wanting Xu, Chengwei Wu, Jiachen Xu, Shanhu Li, Lingqiang Zhang & Lei Dong
Pages: 735-751
Published online: 01 Nov 2023
AbstractforSMURF1 controls the PPP3/calcineurin complex and TFEB at a regulatory node for lysosomal biogenesis | Full Text | References | PDF (4.9 MB) | EPUB | Supplemental
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Open Access
Article
Chaperone-mediated autophagy protects against hyperglycemic stress
Emilio J. Vélez, Simon Schnebert, Maxime Goguet, Sara Balbuena-Pecino, Karine Dias, Linda Beauclair, Stéphanie Fontagné-Dicharry, Vincent Véron, Alexandra Depincé, Florian Beaumatin, Amaury Herpin & Iban Seiliez
Pages: 752-768
Published online: 12 Oct 2023
AbstractforChaperone-mediated autophagy protects against hyperglycemic stress | Full Text | References | PDF (3.4 MB) | EPUB | Supplemental
  • 827 Views
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Article
Removal of hypersignaling endosomes by simaphagy
Simona M. Migliano, Sebastian W. Schultz, Eva M. Wenzel, Szabolcs Takáts, Dan Liu, Silje Mørk, Kia Wee Tan, Tor Erik Rusten, Camilla Raiborg & Harald Stenmark
Pages: 769-791
Published online: 25 Oct 2023
AbstractforRemoval of hypersignaling endosomes by simaphagy | Full Text | References | PDF (8.9 MB) | EPUB | Supplemental
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Open Access
Article
A conserved requirement for RME-8/DNAJC13 in neuronal autophagic lysosome reformation
Sierra B. Swords, Nuo Jia, Anne Norris, Jil Modi, Qian Cai & Barth D. Grant
Pages: 792-808
Published online: 09 Nov 2023
AbstractforA conserved requirement for RME-8/DNAJC13 in neuronal autophagic lysosome reformation | Full Text | References | PDF (4.8 MB) | EPUB | Supplemental
  • 546 Views
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Article
The NLRX1-SLC39A7 complex orchestrates mitochondrial dynamics and mitophagy to rejuvenate intervertebral disc by modulating mitochondrial Zn2+ trafficking
Yu Song, Huaizhen Liang, Gaocai Li, Liang Ma, Dingchao Zhu, Weifeng Zhang, Bide Tong, Shuai Li, Yong Gao, Xinghuo Wu, Yukun Zhang, Xiaobo Feng, Kun Wang & Cao Yang
Pages: 809-829
Published online: 03 Nov 2023
AbstractforThe NLRX1-SLC39A7 complex orchestrates mitochondrial dynamics and mitophagy to rejuvenate intervertebral disc by modulating mitochondrial Zn2+ trafficking | Full Text | References | PDF (7.2 MB) | EPUB | Supplemental
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Open Access
Article
Distinct roles of core autophagy-related genes in zebrafish definitive hematopoiesis
Xiang-Ke Chen, Zhen-Ni Yi, Jack Jark-Yin Lau & Alvin Chun-Hang Ma
Pages: 830-846
Published online: 03 Nov 2023
AbstractforDistinct roles of core autophagy-related genes in zebrafish definitive hematopoiesis | Full Text | References | PDF (6.6 MB) | EPUB | Supplemental
  • 587 Views
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Article
ATG5 (autophagy related 5) in microglia controls hippocampal neurogenesis in Alzheimer disease
Xin Tang, Ellen Walter, Eric Wohleb, Yanbo Fan & Chenran Wang
Pages: 847-862
Published online: 10 Nov 2023
AbstractforATG5 (autophagy related 5) in microglia controls hippocampal neurogenesis in Alzheimer disease | Full Text | References | PDF (5.5 MB) | EPUB | Supplemental
  • 908 Views
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Article
Autophagy captures the retromer-TBC1D5 complex to inhibit receptor recycling
Julian M. Carosi, Leanne K. Hein, Jarrod J. Sandow, Linh V. P. Dang, Kathryn Hattersley, Donna Denton, Sharad Kumar & Timothy J. Sargeant
Pages: 863-882
Published online: 17 Nov 2023
AbstractforAutophagy captures the retromer-TBC1D5 complex to inhibit receptor recycling | Full Text | References | PDF (4.4 MB) | EPUB | Supplemental
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Resource

Article
ATG9 resides on a unique population of small vesicles in presynaptic nerve terminals
Beyenech Binotti, Momchil Ninov, Andreia P. Cepeda, Marcelo Ganzella, Ulf Matti, Dietmar Riedel, Henning Urlaub, Sivakumar Sambandan & Reinhard Jahn
Pages: 883-901
Published online: 08 Nov 2023
AbstractforATG9 resides on a unique population of small vesicles in presynaptic nerve terminals | Full Text | References | PDF (5.3 MB) | EPUB | Supplemental
  • 2418 Views
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Open Access

Toolbox

Article
Automated quantification of vacuole fusion and lipophagy in Saccharomyces cerevisiae from fluorescence and cryo-soft X-ray microscopy data using deep learning
Jacob Marcus Egebjerg, Maria Szomek, Katja Thaysen, Alice Dupont Juhl, Suzana Kozakijevic, Stephan Werner, Christoph Pratsch, Gerd Schneider, Sergey Kapishnikov, Axel Ekman, Richard Röttger & Daniel Wüstner
Pages: 902-922
Published online: 31 Oct 2023
AbstractforAutomated quantification of vacuole fusion and lipophagy in Saccharomyces cerevisiae from fluorescence and cryo-soft X-ray microscopy data using deep learning | Full Text | References | PDF (4 MB) | EPUB | Supplemental
  • 1375 Views
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Open Access

Autophagic Punctum

Article
Inhibiting autophagy before it starts
Yuqi Lin, Biao Yu, Pengfei Fang & Jing Wang
Pages: 923-924
Published online: 10 Apr 2023
AbstractforInhibiting autophagy before it starts | Full Text | References | PDF (417.9 KB) | EPUB
  • 661 Views
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Article
Endophilin-A/SH3GL2 calcium switch for synaptic autophagy induction is impaired by a Parkinson’s risk variant
Marianna Decet & Sandra-Fausia Soukup
Pages: 925-927
Published online: 17 Apr 2023
AbstractforEndophilin-A/SH3GL2 calcium switch for synaptic autophagy induction is impaired by a Parkinson’s risk variant | Full Text | References | PDF (490.2 KB) | EPUB
  • 1562 Views
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Open Access
Article
STING recruits WIPI2 for autophagosome formation
Wei Wan & Wei Liu
Pages: 928-929
Published online: 13 Apr 2023
AbstractforSTING recruits WIPI2 for autophagosome formation | Full Text | References | PDF (204.1 KB) | EPUB
  • 816 Views
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Autophagic punctum

Article Commentary
Blocking glycosphingolipid production alters autophagy in osteoclasts and improves myeloma bone disease
Houfu Leng, Anna Katharina Simon & Nicole J. Horwood
Pages: 930-932
Published online: 29 Sep 2023
AbstractforBlocking glycosphingolipid production alters autophagy in osteoclasts and improves myeloma bone disease | Full Text | References | PDF (687.6 KB) | EPUB
  • 1425 Views
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Open Access
Article Commentary
Secretory autophagy-promoted cargo exocytosis requires active RAB37
Shan-Ying Wu, Yi-Ching Wang, Roberto Zuchini, Kai-Ying Lan, Hsiao-Sheng Liu & Sheng-Hui Lan
Pages: 933-934
Published online: 12 May 2023
AbstractforSecretory autophagy-promoted cargo exocytosis requires active RAB37 | Full Text | References | PDF (447.9 KB) | EPUB
  • 550 Views
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Article Commentary
From jeopardy champion to drug discovery; semantic similarity artificial intelligence
Natalia Moskal & G. Angus McQuibban
Pages: 935-937
Published online: 14 May 2023
AbstractforFrom jeopardy champion to drug discovery; semantic similarity artificial intelligence | Full Text | References | PDF (1.1 MB) | EPUB
  • 252 Views
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Article Commentary
ATG16L1 is equipped with two distinct WIPI2-binding sites to drive autophagy
Xinyu Gong & Lifeng Pan
Pages: 938-940
Published online: 14 May 2023
AbstractforATG16L1 is equipped with two distinct WIPI2-binding sites to drive autophagy | Full Text | References | PDF (440.5 KB) | EPUB
  • 373 Views
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Article Commentary
Autophagy-dependent expression of osteopontin and its downstream Stat3 signaling contributes to lymphatic malformation progression to lymphangiosarcoma
Fuchun Yang & Jun-Lin Guan
Pages: 941-942
Published online: 14 May 2023
AbstractforAutophagy-dependent expression of osteopontin and its downstream Stat3 signaling contributes to lymphatic malformation progression to lymphangiosarcoma | Full Text | References | PDF (201.8 KB) | EPUB
  • 186 Views
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Article Commentary
Mycobacterium tuberculosis induces host autophagic ferritin degradation for enhanced iron bioavailability and bacterial growth
Youchao Dai, Chuanzhi Zhu, Wei Xiao, Xinchun Chen & Yi Cai
Pages: 943-945
Published online: 17 May 2023
AbstractforMycobacterium tuberculosis induces host autophagic ferritin degradation for enhanced iron bioavailability and bacterial growth | Full Text | References | PDF (545.4 KB) | EPUB
  • 678 Views
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Article Commentary
An emerging role of non-canonical conjugation of ATG8 proteins in plant response to heat stress
Xuanang Zheng, Siyu Chen, Caiji Gao & Jun Zhou
Pages: 946-948
Published online: 31 May 2023
AbstractforAn emerging role of non-canonical conjugation of ATG8 proteins in plant response to heat stress | Full Text | References | PDF (438.6 KB) | EPUB
  • 475 Views
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Autophagic Punctum

Article Commentary
Microglial cytokines poison neuronal autophagy via CCR5, a druggable target
Beatrice Paola Festa, Farah H. Siddiqi, Maria Jimenez-Sanchez & David C. Rubinsztein
Pages: 949-951
Published online: 26 Jun 2023
AbstractforMicroglial cytokines poison neuronal autophagy via CCR5, a druggable target | Full Text | References | PDF (406.8 KB) | EPUB
  • 1967 Views
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Open Access
Article Commentary
Unraveling the Link between Class 1A PI3-Kinase, Autophagy, and Myelodysplasia
Kristina Ames & Kira Gritsman
Pages: 952-954
Published online: 12 Jun 2023
AbstractforUnraveling the Link between Class 1A PI3-Kinase, Autophagy, and Myelodysplasia | Full Text | References | PDF (722.2 KB) | EPUB
  • 83 Views
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Article Commentary
ATG8 proteins are co-factors for human dopaminergic neuronal transcriptional control: implications for neuronal resilience in Parkinson disease
Natalia Jiménez-Moreno & Jon D. Lane
Pages: 955-957
Published online: 20 Jun 2023
AbstractforATG8 proteins are co-factors for human dopaminergic neuronal transcriptional control: implications for neuronal resilience in Parkinson disease | Full Text | References | PDF (439.8 KB) | EPUB
  • 299 Views
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Article Commentary
BAX/MLKL signaling contributes to lipotoxicity-induced lysosomal membrane permeabilization in alcohol-associated liver disease
Haibo Dong, Wei Guo & Zhanxiang Zhou
Pages: 958-959
Published online: 13 Jun 2023
AbstractforBAX/MLKL signaling contributes to lipotoxicity-induced lysosomal membrane permeabilization in alcohol-associated liver disease | Full Text | References | PDF (450.3 KB) | EPUB
  • 552 Views
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Article Commentary
A paradigm shift: AMPK negatively regulates ULK1 activity
Ji-Man Park & Do-Hyung Kim
Pages: 960-962
Published online: 20 Jun 2023
AbstractforA paradigm shift: AMPK negatively regulates ULK1 activity | Full Text | References | PDF (314.8 KB) | EPUB
  • 544 Views
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Article Commentary
Autophagy fuels mitochondrial function through regulation of iron metabolism in pancreatic cancer
Subhadip Mukhopadhyay, Joel Encarnacion-Rosado & Alec C. Kimmelman
Pages: 963-964
Published online: 13 Jun 2023
AbstractforAutophagy fuels mitochondrial function through regulation of iron metabolism in pancreatic cancer | Full Text | References | PDF (379.8 KB) | EPUB | Supplemental
  • 766 Views
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Article Commentary
PHAF1/MYTHO is a novel autophagy regulator that controls muscle integrity
Anais Franco-Romero, Jean Philippe Leduc-Gaudet, Sabah NA Hussain, Gilles Gouspillou & Marco Sandri
Pages: 965-967
Published online: 12 Jun 2023
AbstractforPHAF1/MYTHO is a novel autophagy regulator that controls muscle integrity | Full Text | References | PDF (458.6 KB) | EPUB
  • 632 Views
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Autophagic punctum

Article Commentary
Metamorphosis by ATG13 and ATG101 in human autophagy initiation
Anoshi Patel & Alex C. Faesen
Pages: 968-969
Published online: 02 Jul 2023
AbstractforMetamorphosis by ATG13 and ATG101 in human autophagy initiation | Full Text | References | PDF (324.7 KB) | EPUB
  • 902 Views
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Open Access
Article Commentary
Autophagy is required for stem-cell-mediated endometrial programming and the establishment of pregnancy
Pooja Popli & Ramakrishna Kommagani
Pages: 970-972
Published online: 05 Jul 2023
AbstractforAutophagy is required for stem-cell-mediated endometrial programming and the establishment of pregnancy | Full Text | References | PDF (265.4 KB) | EPUB
  • 905 Views
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Article Commentary
The autophagy-related protein ATG5 is a central mediator of a non-canonical autophagy pathway hijacked by HIV-1 to weaken the host’s response to infection
Delphine Judith & Clarisse Berlioz-Torrent
Pages: 973-975
Published online: 09 Jul 2023
AbstractforThe autophagy-related protein ATG5 is a central mediator of a non-canonical autophagy pathway hijacked by HIV-1 to weaken the host’s response to infection | Full Text | References | PDF (589.2 KB) | EPUB
  • 246 Views
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Article Commentary
Tracking the transition from an ATG9A vesicle to an autophagosome
David Broadbent, Carlo Barnaba & Jens C. Schmidt
Pages: 976-977
Published online: 26 Jul 2023
AbstractforTracking the transition from an ATG9A vesicle to an autophagosome | Full Text | References | PDF (230.8 KB) | EPUB
  • 588 Views
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Editor’s corner

Editorial
Autophagy—the crossword puzzle answers
Daniel J. Klionsky
Page: 978
Published online: 05 Mar 2024
AbstractforAutophagy—the crossword puzzle answers | Full Text | PDF (163.4 KB) | EPUB
  • 281 Views
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Free Access

Correction

Correction
CORRECTION
Pages: 979-981
Published online: 21 Mar 2024
First Page PreviewforCORRECTION | Full Text | PDF (550.3 KB) | EPUB
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